RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 IGFLR1Q9H665 355 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 OSGEPQ9NPF4 335 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TMEM30AQ9NV96 361 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 GMIPQ9P107 970 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TJP2Q9UDY2 1190 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 AMFRQ9UKV5 643 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 USTQ9Y2C2 406 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 USP3Q9Y6I4 520 aa11.71□□□□□ -0.53
SHMT2-220ENST00000555634 CUL9Q8IWT3 2517 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TRANK1O15050 2925 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 CTAGE9A4FU28 777 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TMEM191CA6NGB0 347 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 YJEFN3A6XGL0 299 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 E7ENQ6 273 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 DLL1O00548 723 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 DPYSL4O14531 572 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 PRPSAP2O60256 369 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 PALMO75781 387 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 PROSCO94903 275 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 VNN2O95498 520 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 APOEP02649 317 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 KRT7P08729 469 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SLC2A3P11169 496 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 HOXB8P17481 243 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 PFKLP17858 780 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 DDX6P26196 483 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 CASQ1P31415 396 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 RDXP35241 583 aaKnown RBP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 RFC1P35251 1148 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 CDO1Q16878 200 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SLC25A52Q3SY17 297 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 C10orf120Q5SQS8 335 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 HECTD3Q5T447 861 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 BSPRYQ5W0U4 402 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 GPR153Q6NV75 609 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 STRADAQ7RTN6 431 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 REXO1L1PQ8IX06 675 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 EMC1Q8N766 993 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 EFHBQ8N7U6 833 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 CLEC4CQ8WTT0 213 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SLC22A17Q8WUG5 538 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 RXFP2Q8WXD0 754 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
SHMT2-220ENST00000555634 RNF34Q969K3 372 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SLC2A13Q96QE2 648 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TFR2Q9UP52 801 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 JRKLQ9Y4A0 524 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 CAPN6Q9Y6Q1 641 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 DENND4AQ7Z401 1863 aa11.7□□□□□ -0.54
SHMT2-220ENST00000555634 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 CCDC195A0A1B0GUA6 201 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 A0A1W2PQH9 124 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 FAM92AA1XBS5 289 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 CCDC66A2RUB6 948 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 C2CD4BA6NLJ0 364 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 PSTPIP1O43586 416 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-220ENST00000555634 TLR5O60602 858 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 MYL4P12829 197 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 GABRR2P28476 465 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 AIF1P55008 147 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 RPL7AP62424 266 aaKnown RBP11.69□□□□□ -0.54
SHMT2-220ENST00000555634 ATP11AP98196 1134 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 DEUP1Q05D60 604 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 CLUL1Q15846 466 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 RHOT1Q8IXI2 618 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 DEFB106AQ8N104 65 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 C17orf53Q8N3J3 647 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-220ENST00000555634 CMASQ8NFW8 434 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-220ENST00000555634 FAM172AQ8WUF8 416 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 EDEM1Q92611 657 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 CFAP57Q96MR6 1250 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 NAPGQ99747 312 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-220ENST00000555634 PRKD2Q9BZL6 878 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 SMOC2Q9H3U7 446 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 TRPC7Q9HCX4 862 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 DDIT4Q9NX09 232 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 SLC12A6Q9UHW9 1150 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 DNMT3LQ9UJW3 386 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 TMEM59LQ9UK28 342 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 COG5Q9UP83 839 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 DUSP10Q9Y6W6 482 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
SHMT2-220ENST00000555634 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 TCRBV5S1A1TA0A578 114 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 GRID2IPA4D2P6 1211 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms