RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.74■■□□□ 1.71
PRKCH-216ENST00000555542 DNMT3LQ9UJW3 386 aa25.74■■□□□ 1.71
PRKCH-216ENST00000555542 PPP1R3GB7ZBB8 358 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 MDM4O15151 490 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 STX17P56962 302 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 SGO2Q562F6 1265 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 TTI2Q6NXR4 508 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 PIGZQ86VD9 579 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 CCDC33Q8N5R6 958 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 FAM160A2Q8N612 972 aaPredicted RBP25.73■■□□□ 1.71
PRKCH-216ENST00000555542 ANKRD52Q8NB46 1076 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 TSTD1Q8NFU3 115 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 WBP2Q969T9 261 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 NT5C1BQ96P26 610 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 CDK5RAP1Q96SZ6 601 aaKnown RBP25.73■■□□□ 1.71
PRKCH-216ENST00000555542 DUSP9Q99956 384 aaKnown RBP25.73■■□□□ 1.71
PRKCH-216ENST00000555542 HESX1Q9UBX0 185 aa25.73■■□□□ 1.71
PRKCH-216ENST00000555542 BMP6P22004 513 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 PLA2G4AP47712 749 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 LMNB2Q03252 620 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 PAK1Q13153 545 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 PREPLQ4J6C6 727 aaPredicted RBP25.72■■□□□ 1.71
PRKCH-216ENST00000555542 KLHDC10Q6PID8 442 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 HTR3DQ70Z44 454 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 CACNA2D4Q7Z3S7 1137 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 TTC30AQ86WT1 665 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 MIB1Q86YT6 1006 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 TSPAN16Q9UKR8 245 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 USP3Q9Y6I4 520 aa25.72■■□□□ 1.71
PRKCH-216ENST00000555542 GPR179Q6PRD1 2367 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 HOXC11O43248 304 aaPredicted RBP25.71■■□□□ 1.71
PRKCH-216ENST00000555542 TIE1P35590 1138 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 GRIA2P42262 883 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 DGKEP52429 567 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 BCAT1P54687 386 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 MRPS21P82921 87 aaKnown RBP25.71■■□□□ 1.71
PRKCH-216ENST00000555542 NUDT18Q6ZVK8 323 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 RSRC2Q7L4I2 434 aaKnown RBP25.71■■□□□ 1.71
PRKCH-216ENST00000555542 TMEM25Q86YD3 366 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 ARHGAP18Q8N392 663 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 PPM1KQ8N3J5 372 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 CLIC5Q9NZA1 410 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 DEC1Q9P2X7 70 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 RASAL2Q9UJF2 1139 aa25.71■■□□□ 1.71
PRKCH-216ENST00000555542 TBC1D3BA6NDS4 549 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 UBE2HP62256 183 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 RSPO4Q2I0M5 234 aaPredicted RBP25.7■■□□□ 1.7
PRKCH-216ENST00000555542 TPGS1Q6ZTW0 290 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 SCD5Q86SK9 330 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 UBXN6Q9BZV1 441 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 LRRC4Q9HBW1 653 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 PARD6AQ9NPB6 346 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 MMP17Q9ULZ9 603 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 PCDHB4Q9Y5E5 795 aa25.7■■□□□ 1.7
PRKCH-216ENST00000555542 NEDD8-MDP1E9PL57 170 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 KLF8O95600 359 aaPredicted RBP25.69■■□□□ 1.7
PRKCH-216ENST00000555542 GNA14O95837 355 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 VDRP11473 427 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 TKTL1P51854 596 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 EFEMP1Q12805 493 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 PUM1Q14671 1186 aaKnown RBP eCLIP25.69■■□□□ 1.7
PRKCH-216ENST00000555542 CAMK4Q16566 473 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 FOXR2Q6PJQ5 311 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 TMEM270Q6UE05 265 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 SFTPA1Q8IWL2 248 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 ALLCQ8N6M5 410 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 XPO6Q96QU8 1125 aaKnown RBP25.69■■□□□ 1.7
PRKCH-216ENST00000555542 BBS2Q9BXC9 721 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 CHMP5Q9NZZ3 219 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 RALGAPA1Q6GYQ0 2036 aa25.69■■□□□ 1.7
PRKCH-216ENST00000555542 EML5Q05BV3 1969 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 ANTXRLA6NF34 631 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 PRR5-ARHGAP8B1AHC4 643 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 XPO1O14980 1071 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 LRP3O75074 770 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 TULP3O75386 442 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 FGFR1OPO95684 399 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 HMBSP08397 361 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 SDHBP21912 280 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 TNFRSF4P43489 277 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 YWHAGP61981 247 aaKnown RBP eCLIP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 ARHGAP8P85298 464 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 PDE4CQ08493 712 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 MESP2Q0VG99 397 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 BST2Q10589 180 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 ANO7Q6IWH7 933 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 ERMP1Q7Z2K6 904 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 DGLUCYQ7Z3D6 616 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 KBTBD6Q86V97 674 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 TRIML1Q8N9V2 468 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 TXNDC5Q8NBS9 432 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 IPO9Q96P70 1041 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 SRRTQ9BXP5 876 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 SEMA4GQ9NTN9 838 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 DNAJC17Q9NVM6 304 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 EBF1Q9UH73 591 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 CDV3Q9UKY7 258 aaKnown RBP25.68■■□□□ 1.7
PRKCH-216ENST00000555542 STRIP2Q9ULQ0 834 aa25.68■■□□□ 1.7
PRKCH-216ENST00000555542 PMM2O15305 246 aa25.67■■□□□ 1.7
PRKCH-216ENST00000555542 P4HA2O15460 535 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms