RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RNF157Q96PX1 679 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 KCTD15Q96SI1 283 aaPredicted RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 TRIM31Q9BZY9 425 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 WDR6Q9NNW5 1121 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 VNN2O95498 520 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 BOLA3Q53S33 107 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 TNFAIP8L3Q5GJ75 292 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SYPL2Q5VXT5 272 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ICE2Q659A1 982 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 KAZNQ674X7 775 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 DEFB106AQ8N104 65 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ARL8AQ96BM9 186 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 DNAI2Q9GZS0 605 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.29□□□□□ -0.92
TDP1-210ENST00000554976 SAE1Q9UBE0 346 aaPredicted RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 NEU3Q9UQ49 428 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 PLAAQ9Y263 795 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 FAN1Q9Y2M0 1017 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 CST8O60676 142 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 RNF40O75150 1001 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 B3GAT3O94766 335 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 FBXO21O94952 628 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ETS1P14921 441 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 PCSK1P29120 753 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SSR1P43307 286 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 ITGA8P53708 1063 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ATP11AP98196 1134 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 BFSP2Q13515 415 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 PAN2Q504Q3 1202 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 ERMARDQ5T6L9 678 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 RNASEH2BQ5TBB1 312 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 PSTKQ8IV42 348 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 RNF168Q8IYW5 571 aaPredicted RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ACTL9Q8TC94 416 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 HASPINQ8TF76 798 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 IRGQQ8WZA9 623 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 HSPH1Q92598 858 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 DEFB118Q96PH6 123 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 CNGB3Q9NQW8 809 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 RSPH14Q9UHP6 348 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 YJEFN3A6XGL0 299 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 E7ENQ6 273 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 DNALI1O14645 258 aaPredicted RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 AP1G2O75843 785 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 KRT14P02533 472 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TGM2P21980 687 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 NOS2P35228 1153 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 GATMP50440 423 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TKTL1P51854 596 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 PLTPP55058 493 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 SCAPQ12770 1279 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 HLTFQ14527 1009 aaKnown RBP eCLIP9.28□□□□□ -0.92
TDP1-210ENST00000554976 CDO1Q16878 200 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 NPNTQ6UXI9 565 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 BEND5Q7L4P6 421 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 EGFL6Q8IUX8 553 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 KCTD6Q8NC69 237 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 LRRC45Q96CN5 670 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 ULBP1Q9BZM6 244 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 ACBD3Q9H3P7 528 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 NRDE2Q9H7Z3 1164 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 POPDC2Q9HBU9 364 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 PCDH9Q9HC56 1237 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 GPATCH2LQ9NWQ4 482 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 INPP5FQ9Y2H2 1132 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 ZSCAN5DPP0CG00 497 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 FGFR3P22607 806 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 YWHAZP63104 245 aaKnown RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 LMNB2Q03252 620 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 DHX9Q08211 1270 aaKnown RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 GLB1LQ6UWU2 654 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 CTU1Q7Z7A3 348 aaKnown RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 BCL7CQ8WUZ0 217 aaPredicted RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 ZNF333Q96JL9 665 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 OLFM3Q96PB7 478 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TMEM109Q9BVC6 243 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 PABPC3Q9H361 631 aaKnown RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 RC3H2Q9HBD1 1191 aaKnown RBP9.28□□□□□ -0.92
TDP1-210ENST00000554976 USP29Q9HBJ7 922 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 IL37Q9NZH6 218 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TBX21Q9UL17 535 aa9.28□□□□□ -0.92
TDP1-210ENST00000554976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.27□□□□□ -0.93
TDP1-210ENST00000554976 PRPSAP2O60256 369 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 SHBGP04278 402 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 RARGP13631 454 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 PMS2P54278 862 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 CDH6P55285 790 aa9.27□□□□□ -0.93
TDP1-210ENST00000554976 CAV1Q03135 178 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms