RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 RASGRF2O14827 1237 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 CYP1A1P04798 512 aaPredicted RBP17.22■□□□□ 0.35
PCNX1-209ENST00000554879 INHAP05111 366 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 LMO2P25791 158 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 BRCC3P46736 316 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ITGA8P53708 1063 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 M0QYT0 321 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 C2CD2LO14523 706 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 FKTNO75072 461 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 CCL23P55773 120 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 SRRDQ9UH36 339 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 FNTAP49354 379 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 TKTL1P51854 596 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 OTUD4Q01804 1114 aaKnown RBP17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ROR1Q01973 937 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 SEPT6Q14141 434 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ACTL9Q8TC94 416 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 EDEM1Q92611 657 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 CHMP6Q96FZ7 201 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 NUDCD1Q96RS6 583 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 XYLT2Q9H1B5 865 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 KLHL14Q9P2G3 628 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 PCDHB7Q9Y5E2 793 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 RABGGTBP53611 331 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ANKRD20A2Q5SQ80 823 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ANKRD20A1Q5TYW2 823 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 SLFN11Q7Z7L1 901 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 FAM71DQ8N9W8 422 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 NDRG1Q92597 394 aaKnown RBP17.22■□□□□ 0.35
PCNX1-209ENST00000554879 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
PCNX1-209ENST00000554879 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
PCNX1-209ENST00000554879 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 CES2O00748 559 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 KCNN4O15554 427 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 CCND1P24385 295 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 LRRC14Q15048 493 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 ARL13BQ3SXY8 428 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 WLSQ5T9L3 541 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 RAPGEF5Q92565 580 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCNX1-209ENST00000554879 TXNDC16Q9P2K2 825 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 TMEM191CA6NGB0 347 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 SIGLEC16A6NMB1 481 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 RASSF9O75901 435 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 SUN1O94901 812 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 PAX3P23760 479 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 ACADSBP45954 432 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 NUMBP49757 651 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 EFHC2Q5JST6 749 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 LRRC52Q8N7C0 313 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 NKIRAS1Q9NYS0 192 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 APOL1O14791 398 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 TRAPPC3O43617 180 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 SKIP12755 728 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
PCNX1-209ENST00000554879 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.35
PCNX1-209ENST00000554879 HSD17B3P37058 310 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCNX1-209ENST00000554879 TAF5Q15542 800 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 BTBD8Q5XKL5 378 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 PLEKHA7Q6IQ23 1121 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 B3GALNT2Q8NCR0 500 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 HIC2Q96JB3 615 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 RAB3IPQ96QF0 476 aaPredicted RBP17.21■□□□□ 0.35
PCNX1-209ENST00000554879 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
PCNX1-209ENST00000554879 UBTFL6P0CB48 400 aaPredicted RBP17.2■□□□□ 0.34
PCNX1-209ENST00000554879 CLCNKBP51801 687 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 KYNUQ16719 465 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 EFHC1Q5JVL4 640 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 NUGGCQ68CJ6 796 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 ZBED8Q8IZ13 594 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 MCUR1Q96AQ8 359 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 DDIT4Q9NX09 232 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 GALNT8Q9NY28 637 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 FAF1Q9UNN5 650 aaPredicted RBP17.2■□□□□ 0.34
PCNX1-209ENST00000554879 DPPA5A6NC42 116 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 ZCCHC18P0CG32 403 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 ALDH3A1P30838 453 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 ACLYP53396 1101 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 AP1B1Q10567 949 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 PDZD4Q76G19 769 aaPredicted RBP17.2■□□□□ 0.34
PCNX1-209ENST00000554879 PIGZQ86VD9 579 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 PDIK1LQ8N165 341 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 DNPEPQ9ULA0 475 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 CORO1CQ9ULV4 474 aaPredicted RBP17.2■□□□□ 0.34
PCNX1-209ENST00000554879 ATP11BQ9Y2G3 1177 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
PCNX1-209ENST00000554879 BDNFP23560 247 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms