RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 MED10Q9BTT4 135 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 ISCUQ9H1K1 167 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 ACP6Q9NPH0 428 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 CNGB3Q9NQW8 809 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 MAN1C1Q9NR34 630 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 TMEM30AQ9NV96 361 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 ASNSD1Q9NWL6 643 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 INTUQ9ULD6 942 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 NENFQ9UMX5 172 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 SCML2Q9UQR0 700 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 GREB1Q4ZG55 1949 aa6.88□□□□□ -1.31
SEL1L-203ENST00000554744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CLDN5O00501 218 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 DDX3XO00571 662 aaKnown RBP eCLIP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 PER2O15055 1255 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ARHGAP6O43182 974 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 NRDCO43847 1150 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 RTN2O75298 545 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CALB1P05937 261 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MMEP08473 750 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ZDHHC11BP0C7U3 371 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 FOSL2P15408 326 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 HMGA1P17096 107 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 IGFBP4P22692 258 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 NSFP46459 744 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 TUBP50607 506 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 SLC5A3P53794 718 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CACNA2D1P54289 1103 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MAP3K7CLP57077 242 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 RELBQ01201 579 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ARID5AQ03989 594 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 PABPC1LQ4VXU2 614 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ACAD10Q6JQN1 1059 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ANKRD54Q6NXT1 300 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 PMF1Q6P1K2 205 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 DENND1BQ6P3S1 775 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MON1BQ7L1V2 547 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 GPR149Q86SP6 731 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 RBM23Q86U06 439 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MON1AQ86VX9 555 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 TMEM139Q8IV31 216 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 WDTC1Q8N5D0 677 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 KIAA1958Q8N8K9 716 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 SLC20A1Q8WUM9 679 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 SECISBP2LQ93073 1101 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ZNF707Q96C28 371 aaPredicted RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MSLNLQ96KJ4 702 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 PPP1R13BQ96KQ4 1090 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CCDC42Q96M95 316 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ZNF512Q96ME7 567 aaPredicted RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 NECTIN4Q96NY8 510 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 SLITRK1Q96PX8 696 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CDK5RAP1Q96SZ6 601 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 KCNK16Q96T55 309 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 BAG1Q99933 345 aaPredicted RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 LPIN3Q9BQK8 851 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ADAM7Q9H2U9 754 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 NHEJ1Q9H9Q4 299 aaPredicted RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 LRRC4Q9HBW1 653 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CLIC5Q9NZA1 410 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 CLEC1BQ9P126 229 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 WDR35Q9P2L0 1181 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 ADAMTS1Q9UHI8 967 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 NAGPAQ9UK23 515 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 COG5Q9UP83 839 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 MYH10P35580 1976 aa6.87□□□□□ -1.31
SEL1L-203ENST00000554744 A0A087X0T9 212 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 SLC38A8A6NNN8 435 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
SEL1L-203ENST00000554744 ZNF197O14709 1029 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 AKR1B10O60218 316 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 BEST1O76090 585 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 ZBED1O96006 694 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 FAM228BP0C875 321 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 SKILP12757 684 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 PTPN2P17706 415 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 TNFAIP3P21580 790 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 DDX6P26196 483 aaKnown RBP eCLIP6.86□□□□□ -1.31
SEL1L-203ENST00000554744 YWHAQP27348 245 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 WEE1P30291 646 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 CDC25CP30307 473 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 CYLC1P35663 651 aaPredicted RBP6.86□□□□□ -1.31
SEL1L-203ENST00000554744 LTBRP36941 435 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
SEL1L-203ENST00000554744 TWF1Q12792 350 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 ZNF268Q14587 947 aaPredicted RBP6.86□□□□□ -1.31
SEL1L-203ENST00000554744 TCEAL1Q15170 157 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 TAF12Q16514 161 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 DDR2Q16832 855 aa6.86□□□□□ -1.31
SEL1L-203ENST00000554744 EFHC1Q5JVL4 640 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms