RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CWF19L1Q69YN2 538 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 HEATR6Q6AI08 1181 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 C11orf63Q6NUN7 778 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 C1orf229Q6ZS94 237 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ARHGEF18Q6ZSZ5 1173 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ANKS1BQ7Z6G8 1248 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MTDHQ86UE4 582 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MYO1HQ8N1T3 1032 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GLIS1Q8NBF1 620 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 BVESQ8NE79 360 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PLEKHO2Q8TD55 490 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF526Q8TF50 670 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 PSPC1Q8WXF1 523 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DNAJC9Q8WXX5 260 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RPGRQ92834 1020 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF653Q96CK0 615 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 C1orf159Q96HA4 380 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DYDC2Q96IM9 177 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RUNDC3BQ96NL0 473 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 RAB3IPQ96QF0 476 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 DDX50Q9BQ39 737 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ANKRD2Q9GZV1 360 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 LRMDAQ9H2I8 198 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TAOK3Q9H2K8 898 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ARNT2Q9HBZ2 717 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 JPH1Q9HDC5 661 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ALG13Q9NP73 1137 aaKnown RBP2.7□□□□□ -1.98
PRPF39-207ENST00000554439 UBN1Q9NPG3 1134 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CRTAC1Q9NQ79 661 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 TXLNGQ9NUQ3 528 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 NMRK1Q9NWW6 199 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 KCNK4Q9NYG8 393 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 NKIRAS1Q9NYS0 192 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 CRIM1Q9NZV1 1036 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ANAPC5Q9UJX4 755 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 GGA1Q9UJY5 639 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 VAV3Q9UKW4 847 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 MTUS1Q9ULD2 1270 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 FRMD4BQ9Y2L6 1034 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 EMC9Q9Y3B6 208 aa2.7□□□□□ -1.98
PRPF39-207ENST00000554439 ATP8B3O60423 1300 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ADGRA3Q8IWK6 1321 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 XIRP1Q702N8 1843 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CYP3A7-CYP3A51PA0A087WV96 503 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 IGKV6D-41A0A0C4DH26 115 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GSTTP1A0A1W2PQM5 241 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 LRRD1A4D1F6 860 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GOLGA8IPA6NC78 632 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 FAM47DPA6NHR8 397 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 SIGLEC16A6NMB1 481 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GOLGA8JA6NMD2 632 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 hCG_1984214I3L0E3 225 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GOLGA8RI6L899 631 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 MAPK13O15264 365 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 AHCYL1O43865 530 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 EXOC3O60645 756 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 SLITRK3O94933 977 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CYP3A4P08684 503 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ETS1P14921 441 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CD247P20963 164 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CYP3A7P24462 503 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CALRP27797 417 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GJC1P36383 396 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 SKIV2L2P42285 1042 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ID4P47928 161 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RPS6KA3P51812 740 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RWDD2BP57060 319 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GPSM2P81274 684 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 IL9RQ01113 521 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 FMO1Q01740 532 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 GABPAQ06546 454 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 KLC1Q07866 573 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CCDC15Q0P6D6 951 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 PIN1Q13526 163 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ACVR2BQ13705 512 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RCN2Q14257 317 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 KPNB1Q14974 876 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 EFTUD2Q15029 972 aaKnown RBP eCLIP2.69□□□□□ -1.983e-10■■■■□ 25.3
PRPF39-207ENST00000554439 RBBP5Q15291 538 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RCN1Q15293 331 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 MAPK6Q16659 721 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 MUM1Q2TAK8 710 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 SLC10A5Q5PT55 438 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 C1orf220Q5T0J3 134 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RNF219Q5W0B1 726 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 OR52E8Q6IFG1 317 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 CLEC4GQ6UXB4 293 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 C1orf186Q6ZWK4 172 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF720Q7Z2F6 126 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ZC3H18Q86VM9 953 aaKnown RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ZFPM1Q8IX07 1006 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 KBTBD2Q8IY47 623 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 TEX9Q8N6V9 391 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 ZNF713Q8N859 430 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-207ENST00000554439 RFWD2Q8NHY2 731 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 WDR60Q8WVS4 1066 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 C10orf82Q8WW14 230 aa2.69□□□□□ -1.98
PRPF39-207ENST00000554439 MAML1Q92585 1016 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms