RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ANKRD40Q6AI12 368 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PDE12Q6L8Q7 609 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LINGO4Q6UY18 593 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ASCL5Q7RTU5 278 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TAS1R3Q7RTX0 852 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 OSTM1Q86WC4 334 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM25Q86YD3 366 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EGFL6Q8IUX8 553 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DHX40Q8IX18 779 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 AOPEPQ8N6M6 819 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FBXL13Q8NEE6 735 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GDAP1Q8TB36 358 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SHKBP1Q8TBC3 707 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SPPL2BQ8TCT7 592 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 UCMAQ8WVF2 138 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CPA5Q8WXQ8 436 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RUBCNQ92622 972 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TNFRSF25Q93038 417 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EXOC2Q96KP1 924 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C11orf70Q9BRQ4 267 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LSM14BQ9BX40 385 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CCSER1Q9C0I3 900 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 HAPLN2Q9GZV7 340 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GOLPH3LQ9H4A5 285 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ASB7Q9H672 318 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FBRSL1Q9HCM7 1045 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CISHQ9NSE2 258 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SEPT10Q9P0V9 454 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IGSF9Q9P2J2 1179 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GULP1Q9UBP9 304 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 VPS28Q9UK41 221 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 VANGL2Q9ULK5 521 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NFE2L3Q9Y4A8 694 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SQORQ9Y6N5 450 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LAMA1P25391 3075 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 COL12A1Q99715 3063 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ATP8B3O60423 1300 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FRMPD4Q14CM0 1322 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ATAD5Q96QE3 1844 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PTPRFP10586 1907 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DOPEY2Q9Y3R5 2298 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ROS1P08922 2347 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TLN1Q9Y490 2541 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IGKV6-21A0A0C4DH24 114 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 OR6C75A6NL08 312 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C4orf47A7E2U8 309 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SPECC1L-ADORA2AF8WAN1 911 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TULP2O00295 520 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PLK4O00444 970 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FFAR2O15552 330 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF500O60304 480 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RPP40O75818 363 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 STBD1O95210 358 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ASMTLO95671 621 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FGFR1OPO95684 399 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TPM1P09493 284 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PYGBP11216 843 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SRFP11831 508 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DESP17661 470 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CTNNA2P26232 953 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RDXP35241 583 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PNPLA4P41247 253 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EVCP57679 992 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM189BP81408 668 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SATB1Q01826 763 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PTK2Q05397 1052 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM160A1Q05DH4 1040 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CYP24A1Q07973 514 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KCNH2Q12809 1159 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GPR17Q13304 367 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CCINQ13939 588 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SURF1Q15526 300 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ASIC2Q16515 512 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SOWAHAQ2M3V2 549 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ZC3H12AQ5D1E8 599 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PPP1R26Q5T8A7 1209 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM102AQ5T9C2 384 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SPATA1Q5VX52 437 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RAP1GAP2Q684P5 730 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PSAPL1Q6NUJ1 521 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C11orf96Q7Z7L8 435 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PIGZQ86VD9 579 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM131BQ86XD5 332 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MARCH9Q86YJ5 346 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GATAD2AQ86YP4 633 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MMAAQ8IVH4 418 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MAP4K3Q8IVH8 894 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MFN1Q8IWA4 741 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SFTPA1Q8IWL2 248 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 BRSK2Q8IWQ3 736 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 BBS7Q8IWZ6 715 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NUP93Q8N1F7 819 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CPA6Q8N4T0 437 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EMC1Q8N766 993 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DTWD2Q8NBA8 298 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LRRC15Q8TF66 581 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SIPA1Q96FS4 1042 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SUSD3Q96L08 255 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 HSPA12BQ96MM6 686 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 XPO6Q96QU8 1125 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms