RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ARRDC1-AS1Q9H2J1 176 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 APOBEC3GQ9HC16 384 aaKnown RBP6.98□□□□□ -1.29
SLIRP-203ENST00000554074 ARHGEF4Q9NR80 690 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 SPHK2Q9NRA0 654 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 FAM49BQ9NUQ9 324 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 RMND1Q9NWS8 449 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 MARK1Q9P0L2 795 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 GMIPQ9P107 970 aa6.98□□□□□ -1.29
SLIRP-203ENST00000554074 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 BCLAF3A2AJT9 711 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 DCDC2BA2VCK2 349 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TM4SF5O14894 197 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CETN3O15182 167 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CACNG3O60359 315 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 GREM1O60565 184 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TULP3O75386 442 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 ADRB1P08588 477 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TRIM49P0CI25 452 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TRIM49CP0CI26 452 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 EPB41P11171 864 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 ADORA2BP29275 332 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 ATP5C1P36542 298 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 DPP6P42658 865 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 SLC6A11P48066 632 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 GCLMP48507 274 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 MXI1P50539 228 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 KIF11P52732 1056 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 SEC13P55735 322 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 MAP3K7CLP57077 242 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 SPDYCQ5MJ68 293 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 IL31Q6EBC2 164 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CLEC17AQ6ZS10 378 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC186Q7Z3E2 898 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TADA2BQ86TJ2 420 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 BBS7Q8IWZ6 715 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 ZC3H3Q8IXZ2 948 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TERB1Q8NA31 727 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TXNDC5Q8NBS9 432 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 FBXL13Q8NEE6 735 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 MDGA1Q8NFP4 955 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 ELMO3Q96BJ8 720 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CHAMP1Q96JM3 812 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 GSDMAQ96QA5 445 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TWNKQ96RR1 684 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CDK5RAP1Q96SZ6 601 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 DUSP16Q9BY84 665 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 UBXN6Q9BZV1 441 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 NACA2Q9H009 215 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 GOLPH3LQ9H4A5 285 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 POLMQ9NP87 494 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 POLR3BQ9NW08 1133 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CLIC5Q9NZA1 410 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 WDR35Q9P2L0 1181 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 DEC1Q9P2X7 70 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 LSM7Q9UK45 103 aaKnown RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 MAPK8IP1Q9UQF2 711 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 COQ4Q9Y3A0 265 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 STARD13Q9Y3M8 1113 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 USP3Q9Y6I4 520 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 CHD8Q9HCK8 2581 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 TP53BP1Q12888 1972 aaPredicted RBP6.97□□□□□ -1.29
SLIRP-203ENST00000554074 PCDH15Q96QU1 1955 aa6.97□□□□□ -1.29
SLIRP-203ENST00000554074 NYNRINQ9P2P1 1898 aaKnown RBP6.96□□□□□ -1.29
SLIRP-203ENST00000554074 KMT2BQ9UMN6 2715 aaPredicted RBP6.96□□□□□ -1.29
SLIRP-203ENST00000554074 SGK1O00141 431 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SLC16A3O15427 465 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 CYP26A1O43174 497 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 GDF9O60383 454 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ADAM23O75077 832 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 KLF8O95600 359 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 HNRNPLP14866 589 aaKnown RBP eCLIP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ACO1P21399 889 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 TIE1P35590 1138 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 P2RY2P41231 377 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 PLA2G4AP47712 749 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 PGFP49763 221 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 FKBP3Q00688 224 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 LRRC63Q05C16 580 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 MESP2Q0VG99 397 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ORC1Q13415 861 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 BYSLQ13895 437 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SF3A2Q15428 464 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 PPP1R26Q5T8A7 1209 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 STPG1Q5TH74 334 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF658Q5TYW1 1059 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ARHGAP17Q68EM7 881 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ANO7Q6IWH7 933 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM92Q6UXU6 159 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 Q6ZNB5 142 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 GPRIN1Q7Z2K8 1008 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM25Q86YD3 366 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SFTPA1Q8IWL2 248 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ELOA2Q8IYF1 753 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 CCDC33Q8N5R6 958 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ALLCQ8N6M5 410 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms