RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 RARGP13631 454 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ATP5C1P36542 298 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 KIF11P52732 1056 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 GAD2Q05329 585 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CCDC6Q16204 474 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CSRP2Q16527 193 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SCD5Q86SK9 330 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 TTC39CQ8N584 583 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ALLCQ8N6M5 410 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 OTUB2Q96DC9 234 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ARRDC1-AS1Q9H2J1 176 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ARMCX3Q9UH62 379 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 EBF1Q9UH73 591 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 HOOK1Q9UJC3 728 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 INVSQ9Y283 1065 aa12.53□□□□□ -0.4
TRAPPC6B-204ENST00000554018 PLXND1Q9Y4D7 1925 aa12.52□□□□□ -0.4
TRAPPC6B-204ENST00000554018 A0A0A0MRY4 1105 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MED19A0JLT2 244 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TRIM24O15164 1050 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HOXC11O43248 304 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TULP3O75386 442 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KLF8O95600 359 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HNRNPLP14866 589 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SDHBP21912 280 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TIE1P35590 1138 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 EIF2DP41214 584 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GRIA2P42262 883 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DGKEP52429 567 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MRPS21P82921 87 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LRRC63Q05C16 580 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ANO4Q32M45 955 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 C10orf120Q5SQS8 335 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BTBD8Q5XKL5 378 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ANO7Q6IWH7 933 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PRR23CQ6ZRP0 262 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HTR3DQ70Z44 454 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SLC35C1Q96A29 364 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZC3H10Q96K80 434 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SPHK2Q9NRA0 654 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MMP17Q9ULZ9 603 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 COQ4Q9Y3A0 265 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SGK1O00141 431 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PSMA7O14818 248 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GDF9O60383 454 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 EPN2O95208 641 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BMP6P22004 513 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LRMPQ12912 555 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 STIM1Q13586 685 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CUL2Q13617 745 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SF3A2Q15428 464 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CRY1Q16526 586 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PLK5Q496M5 336 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KLHL10Q6JEL2 608 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MIB1Q86YT6 1006 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TPSD1Q9BZJ3 242 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DUSP15Q9H1R2 295 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DEC1Q9P2X7 70 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DNMT3LQ9UJW3 386 aa12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DCDC2BA2VCK2 349 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TULP2O00295 520 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ADAM23O75077 832 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms