RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SLC9A3R1O14745 358 aaPredicted RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 SH3BP5O60239 455 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 GNA14O95837 355 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CFIP05156 583 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 SYPP08247 313 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 FTH1P19P0C7X4 201 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 EPB41P11171 864 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 PSMC2P35998 433 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 SLC6A11P48066 632 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 PPP3CCP48454 512 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 AP3M2P53677 418 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 PMS1P54277 932 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 TYRO3Q06418 890 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 ZNF33AQ06730 810 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CYP24A1Q07973 514 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 EMC10Q5UCC4 262 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CEP135Q66GS9 1140 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 DBX2Q6ZNG2 339 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 INTS8Q75QN2 995 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 ARMCX6Q7L4S7 300 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 LIMS2Q7Z4I7 341 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 FILIP1Q7Z7B0 1213 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 WDR49Q8IV35 697 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 SFTPA1Q8IWL2 248 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CSGALNACT2Q8N6G5 542 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 NOC3LQ8WTT2 800 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 FAM212AQ96EL1 285 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 ZNF419Q96HQ0 510 aaPredicted RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 TTLL2Q9BWV7 592 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 GTPBP2Q9BX10 602 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 METTL14Q9HCE5 456 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CD248Q9HCU0 757 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 TRPC7Q9HCX4 862 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 FSCN3Q9NQT6 498 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 GDAP2Q9NXN4 497 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 DDX43Q9NXZ2 648 aaKnown RBP8.21□□□□□ -1.1
ABCD4-220ENST00000553998 GTF3C4Q9UKN8 822 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 L1RE1Q9UN81 338 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 CTNND2Q9UQB3 1225 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 STARD13Q9Y3M8 1113 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 KALRNO60229 2985 aa8.21□□□□□ -1.1
ABCD4-220ENST00000553998 ATG2BQ96BY7 2078 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 IGHV1OR15-9A0A0B4J2B8 117 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TRIM49BA6NDI0 452 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ZNF840PA6NDX5 716 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 IKBKBO14920 756 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 APODP05090 189 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 KRT13P13646 458 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 GABRG2P18507 467 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TIE1P35590 1138 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 LHX1P48742 406 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 CASP4P49662 377 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 STX17P56962 302 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 CLDN10P78369 228 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 MYL7Q01449 175 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 VSTM1Q6UX27 236 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TOGARAM2Q6ZUX3 1019 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 DPH6Q7L8W6 267 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 SLCO6A1Q86UG4 719 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 C12orf40Q86WS4 652 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 SLC41A1Q8IVJ1 513 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 FAM186BQ8IYM0 893 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 TOP6BLQ8N6T0 577 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 LRRC52Q8N7C0 313 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ENOX1Q8TC92 643 aaKnown RBP8.2□□□□□ -1.1
ABCD4-220ENST00000553998 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
ABCD4-220ENST00000553998 HMGB4Q8WW32 186 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ZNF560Q96MR9 790 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 CAMK1GQ96NX5 476 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 CGRRF1Q99675 332 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 FUCA2Q9BTY2 467 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ZDHHC5Q9C0B5 715 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 RNF38Q9H0F5 515 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 FAM124BQ9H5Z6 455 aaPredicted RBP8.2□□□□□ -1.1
ABCD4-220ENST00000553998 PDE11AQ9HCR9 933 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 BCCIPQ9P287 314 aaKnown RBP eCLIP8.2□□□□□ -1.1
ABCD4-220ENST00000553998 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
ABCD4-220ENST00000553998 ATXN2Q99700 1313 aaKnown RBP8.2□□□□□ -1.1
ABCD4-220ENST00000553998 PTPRDP23468 1912 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 HELZP42694 1942 aaKnown RBP8.19□□□□□ -1.1
ABCD4-220ENST00000553998 ADAMTS20P59510 1910 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 ANAPC1Q9H1A4 1944 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 A0A087WV48 116 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 A0A1W2PQF6 199 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 SYCE3A1L190 88 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.19□□□□□ -1.1
ABCD4-220ENST00000553998 TK2O00142 265 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 STX10O60499 249 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 HUS1O60921 280 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 ZNF217O75362 1048 aa8.19□□□□□ -1.1
ABCD4-220ENST00000553998 OAS1P00973 400 aaKnown RBP8.19□□□□□ -1.1
ABCD4-220ENST00000553998 TMEM191BP0C7N4 346 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms