RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 HADHQ16836 314 aaKnown RBP12.29□□□□□ -0.44
NEK9-202ENST00000553823 CDO1Q16878 200 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 C15orf59Q2T9L4 293 aaPredicted RBP12.29□□□□□ -0.44
NEK9-202ENST00000553823 SLC25A52Q3SY17 297 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 LRRC38Q5VT99 294 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 LILRA6Q6PI73 481 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 RHOT1Q8IXI2 618 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 ARHGAP18Q8N392 663 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 ARFGAP1Q8N6T3 406 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 KRT35Q92764 455 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 FBXO32Q969P5 355 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 PBKQ96KB5 322 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 PSMB7Q99436 277 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 TTLL2Q9BWV7 592 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 CERS4Q9HA82 394 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 ABCC13Q9NSE7 274 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 CDC23Q9UJX2 597 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 NAALADL1Q9UQQ1 740 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEK9-202ENST00000553823 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 TRIOBPQ9H2D6 2365 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 A0A1W2PQH9 124 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 CES2O00748 559 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 C1RP00736 705 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SPATA31D3P0C874 917 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 NCAM1P13591 858 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 MIPP30301 263 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 CXCR5P32302 372 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 MARCKSL1P49006 195 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 PSEN1P49768 467 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SULT1E1P49888 294 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 PEX5P50542 639 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 EPHB3P54753 998 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 RWDD2BP57060 319 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 TWF1Q12792 350 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 TAF10Q12962 218 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 TAF12Q16514 161 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SH3PXD2AQ5TCZ1 1133 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 BTBD8Q5XKL5 378 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SPATA31D4Q6ZUB0 917 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 CCDC149Q6ZUS6 474 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SCD5Q86SK9 330 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 KREMEN2Q8NCW0 462 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 COG1Q8WTW3 980 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 FAM172AQ8WUF8 416 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 EDEM1Q92611 657 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 CENPIQ92674 756 aaPredicted RBP12.28□□□□□ -0.44
NEK9-202ENST00000553823 ALG3Q92685 438 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 NT5C3BQ969T7 300 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 SLITRK1Q96PX8 696 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 TBCBQ99426 244 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 NPY6RQ99463 290 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 LMAN2LQ9H0V9 348 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 CARD9Q9H257 536 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 L2HGDHQ9H9P8 463 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 NMUR1Q9HB89 426 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 GMIPQ9P107 970 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
NEK9-202ENST00000553823 MRFAP1Q9Y605 127 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 ANAPC1Q9H1A4 1944 aa12.28□□□□□ -0.44
NEK9-202ENST00000553823 COL4A4P53420 1690 aaPredicted RBP12.28□□□□□ -0.44
NEK9-202ENST00000553823 DENND4CQ5VZ89 1909 aa12.27□□□□□ -0.44
NEK9-202ENST00000553823 M0QYT0 321 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 ZNF185O15231 689 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TNRC18O15417 2968 aaPredicted RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 PRPSAP2O60256 369 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TRUB2O95900 331 aaKnown RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 C8AP07357 584 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 KRT7P08729 469 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TCF4P15884 667 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 HMGA1P17096 107 aaKnown RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 GJC1P36383 396 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 CLCN4P51793 760 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 HDAC4P56524 1084 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 WHAMMP3Q1A5X7 153 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 DCAF12L1Q5VU92 463 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 RTL10Q7L3V2 364 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 POLNQ7Z5Q5 900 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 ITIH5Q86UX2 942 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 SLC7A14Q8TBB6 771 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 RNF139Q8WU17 664 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TIFAQ96CG3 184 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.45
NEK9-202ENST00000553823 MYRFLQ96LU7 910 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 TLR8Q9NR97 1041 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms