RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 GRM2Q14416 872 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 BSPRYQ5W0U4 402 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 BEND5Q7L4P6 421 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 DDX42Q86XP3 938 aaKnown RBP eCLIP12.23□□□□□ -0.45
PSMC6-204ENST00000553798 SCUBE3Q8IX30 993 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 YAF2Q8IY57 180 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 TMEM35BQ8NCS4 154 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 NDRG1Q92597 394 aaKnown RBP12.23□□□□□ -0.45
PSMC6-204ENST00000553798 IQCDQ96DY2 449 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 NOX5Q96PH1 765 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 C1QTNF1Q9BXJ1 281 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 KLF16Q9BXK1 252 aaPredicted RBP12.23□□□□□ -0.45
PSMC6-204ENST00000553798 XPO4Q9C0E2 1151 aaKnown RBP12.23□□□□□ -0.45
PSMC6-204ENST00000553798 BRD9Q9H8M2 597 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 C11orf16Q9NQ32 467 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 AIPL1Q9NZN9 384 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 DNMT3LQ9UJW3 386 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 CPQQ9Y646 472 aa12.23□□□□□ -0.45
PSMC6-204ENST00000553798 HELZP42694 1942 aaKnown RBP12.23□□□□□ -0.45
PSMC6-204ENST00000553798 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 TMEM221A6NGB7 291 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 E5RJQ4 531 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 M0R296 226 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 LEFTY2O00292 366 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 PAPSS1O43252 624 aaPredicted RBP12.22□□□□□ -0.45
PSMC6-204ENST00000553798 CYP1A1P04798 512 aaPredicted RBP12.22□□□□□ -0.45
PSMC6-204ENST00000553798 TPM3P06753 285 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 MMEP08473 750 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 CCDC172P0C7W6 258 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
PSMC6-204ENST00000553798 GLULP15104 373 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 FERP16591 822 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 CHRNB2P17787 502 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 SNX16P57768 344 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 MTF1Q14872 753 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 SLC44A4Q53GD3 710 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 SARM1Q6SZW1 724 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 PASD1Q8IV76 773 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 SLC20A1Q8WUM9 679 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 CPXM1Q96SM3 734 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 ST7Q9NRC1 585 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 GKN1Q9NS71 199 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 ABCC13Q9NSE7 274 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
PSMC6-204ENST00000553798 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
PSMC6-204ENST00000553798 F5P12259 2224 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 E2F8A0AVK6 867 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 KRBA1A5PL33 1030 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 PIK3R2O00459 728 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 CBFA2T2O43439 604 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 GREM1O60565 184 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 LTFP02788 710 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 FYNP06241 537 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 GLI1P08151 1106 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 GABRB2P47870 512 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 STARD6P59095 220 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 NOMO3P69849 1222 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 FMO1Q01740 532 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 PRKCQQ04759 706 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 PDGFRLQ15198 375 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 PTPN20Q4JDL3 420 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 C10orf120Q5SQS8 335 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 TAF3Q5VWG9 929 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
PSMC6-204ENST00000553798 MSANTD2Q6P1R3 559 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 TRIM72Q6ZMU5 477 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 HTR3DQ70Z44 454 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 ZDHHC17Q8IUH5 632 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.45
PSMC6-204ENST00000553798 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 OSCP1Q8WVF1 389 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 SYN2Q92777 582 aaPredicted RBP12.21□□□□□ -0.45
PSMC6-204ENST00000553798 SYT11Q9BT88 431 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.45
PSMC6-204ENST00000553798 TRIM62Q9BVG3 475 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 NACA2Q9H009 215 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 MIS12Q9H081 205 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 SMPD4Q9NXE4 827 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 CFAP97Q9P2B7 532 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 FBXL21Q9UKT6 434 aa12.21□□□□□ -0.45
PSMC6-204ENST00000553798 COL4A2P08572 1712 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 SHISA7A6NL88 538 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 LRRC53A6NM62 1247 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
PSMC6-204ENST00000553798 ERBB2P04626 1255 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 PRKCIP41743 596 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 COG7P83436 770 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
PSMC6-204ENST00000553798 EML3Q32P44 896 aa12.2□□□□□ -0.46
PSMC6-204ENST00000553798 TMEM31Q5JXX7 168 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms