RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ZBTB45Q96K62 511 aaPredicted RBP3.94□□□□□ -1.78
VRK1-202ENST00000553683 SNX27Q96L92 541 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 WDR24Q96S15 920 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 MMS19Q96T76 1030 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 MACROD1Q9BQ69 325 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 SLC25A32Q9H2D1 315 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 ASIC5Q9NY37 505 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 SEMA5BQ9P283 1151 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 SLC27A6Q9Y2P4 619 aa3.94□□□□□ -1.78
VRK1-202ENST00000553683 DNAJC9-AS1A6NH13 148 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 TMEM232C9JQI7 657 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 AGPSO00116 658 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 HNRNPDLO14979 420 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 PRC1O43663 620 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CCNT2O60583 730 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 COQ9O75208 318 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 FGF18O76093 207 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 PDE8BO95263 885 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 KRT18P05783 430 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 MYL1P05976 194 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 HMGB1P09429 215 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 NHLRC4P0CG21 123 aaPredicted RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 TMEM225BP0DP42 221 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CYP2A6P11509 494 aaPredicted RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 KELP23276 732 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 FPR3P25089 353 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 EPHB2P29323 1055 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 HTR7P34969 479 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 STT3AP46977 705 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 PRIM2P49643 509 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 DNASE1L3Q13609 305 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 SRSF7Q16629 238 aaKnown RBP eCLIP3.93□□□□□ -1.78
VRK1-202ENST00000553683 MEX3CQ5U5Q3 659 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 DPY19L3Q6ZPD9 716 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 UBE2Q1Q7Z7E8 422 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CCAR1Q8IX12 1150 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 SUN3Q8TAQ9 357 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 PIGOQ8TEQ8 1089 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 OVCA2Q8WZ82 227 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 EDC3Q96F86 508 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 HIC2Q96JB3 615 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 GDF15Q99988 308 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 FAM118BQ9BPY3 351 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 NUDT22Q9BRQ3 303 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 TMEM79Q9BSE2 394 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CINPQ9BW66 212 aaPredicted RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 NAA15Q9BXJ9 866 aaKnown RBP3.93□□□□□ -1.78
VRK1-202ENST00000553683 NRIP3Q9NQ35 241 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 FZD4Q9ULV1 537 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CA14Q9ULX7 337 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 BTBD3Q9Y2F9 522 aa3.93□□□□□ -1.78
VRK1-202ENST00000553683 A0A087WZ62 844 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 APOL1O14791 398 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 PMM2O15305 246 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 GCATO75600 419 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 PRR35P0CG20 571 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ATF7P17544 494 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 MCM5P33992 734 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ABCG1P45844 678 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ITGA8P53708 1063 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 AK2P54819 239 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 MTAPQ13126 283 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 KCNJ12Q14500 433 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 KCNAB1Q14722 419 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 DAZAP2Q15038 168 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 SLC5A9Q2M3M2 681 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ARL13BQ3SXY8 428 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 TMEM119Q4V9L6 283 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 FAXCQ5TGI0 409 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 KIAA0408Q6ZU52 694 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 LIX1LQ8IVB5 337 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 PNISRQ8TF01 805 aaKnown RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 P2RY11Q96G91 374 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 KAZALD1Q96I82 304 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 RNF26Q9BY78 433 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 PRSS22Q9GZN4 317 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ARNT2Q9HBZ2 717 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 NECTIN3Q9NQS3 549 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 TM7SF3Q9NS93 570 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 TBC1D23Q9NUY8 699 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 ZNF70Q9UC06 446 aaPredicted RBP3.92□□□□□ -1.78
VRK1-202ENST00000553683 WDR17Q8IZU2 1322 aa3.92□□□□□ -1.78
VRK1-202ENST00000553683 RASA4BC9J798 803 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 APAF1O14727 1248 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 KPNA5O15131 536 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 RASA4O43374 803 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 CBFA2T3O75081 653 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 BCAR3O75815 825 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 WDR47O94967 919 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 NBPF7P0C2Y1 421 aaPredicted RBP3.91□□□□□ -1.78
VRK1-202ENST00000553683 EGR1P18146 543 aa3.91□□□□□ -1.78
VRK1-202ENST00000553683 MATN1P21941 496 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms