RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TMEM196Q5HYL7 178 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 PPM1JQ5JR12 505 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 PAPD7Q5XG87 772 aaKnown RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 TMEM150AQ86TG1 271 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 NT5DC4Q86YG4 428 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 MAB21L3Q8N8X9 362 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 CALR3Q96L12 384 aaKnown RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 CARD6Q9BX69 1037 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 LACRTQ9GZZ8 138 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 IKZF4Q9H2S9 585 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 ARGLU1Q9NWB6 273 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 ABI2Q9NYB9 513 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-209ENST00000553659 PCDHB5Q9Y5E4 795 aa16.92■□□□□ 0.3
ACTN1-209ENST00000553659 CCDC163A0A0D9SF12 145 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 A0A0U1RQJ8 604 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 TRDMT1O14717 391 aaKnown RBP16.91■□□□□ 0.3
ACTN1-209ENST00000553659 GDF9O60383 454 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 ATG13O75143 517 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 IL18RAPO95256 599 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 TUBBP07437 444 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 PRLRP16471 622 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 ADSSP30520 456 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 AVPR1AP37288 418 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 CYP24A1Q07973 514 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.3
ACTN1-209ENST00000553659 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 TRAPPC11Q7Z392 1133 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 EFCAB13Q8IY85 973 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 PARD3BQ8TEW8 1205 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 GAB3Q8WWW8 586 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 USP13Q92995 863 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-209ENST00000553659 HPS4Q9NQG7 708 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 TDP1Q9NUW8 608 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 COQ4Q9Y3A0 265 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
ACTN1-209ENST00000553659 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-209ENST00000553659 CSH1P0DML2 217 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 CSH2P0DML3 217 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 PNPLA4P41247 253 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 AMPD2Q01433 879 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-209ENST00000553659 FSTL4Q6MZW2 842 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 PKN3Q6P5Z2 889 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 LMO3Q8TAP4 145 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 DDX1Q92499 740 aaKnown RBP16.9■□□□□ 0.3
ACTN1-209ENST00000553659 LOXL4Q96JB6 756 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 ZNF560Q96MR9 790 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 EBF3Q9H4W6 596 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 KIF9Q9HAQ2 790 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 CCL26Q9Y258 94 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
ACTN1-209ENST00000553659 CTAGE15A4D2H0 777 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 AXIN1O15169 862 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 RPP40O75818 363 aaKnown RBP16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CTAGE8P0CG41 777 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 AP3M2P53677 418 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 MFAP3P55082 362 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 TSPY1Q01534 308 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 ARID5AQ03989 594 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 PTK2Q05397 1052 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 PPP3CAQ08209 521 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 PSMD6Q15008 389 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 NFE2Q16621 373 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-209ENST00000553659 TXNDC8Q6A555 127 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 TRIM68Q6AZZ1 485 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CTAGE6Q86UF2 777 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CTAGE4Q8IX94 777 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 UBE2Q2Q8WVN8 375 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 MRPS31Q92665 395 aaKnown RBP16.89■□□□□ 0.29
ACTN1-209ENST00000553659 CHFRQ96EP1 664 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 PI4K2AQ9BTU6 479 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 ADAMTS1Q9UHI8 967 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-209ENST00000553659 SLC8A2Q9UPR5 921 aa16.89■□□□□ 0.29
ACTN1-209ENST00000553659 A0A0A6YYK5 440 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 MACROD2A1Z1Q3 448 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 RCCD1A6NED2 376 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 KRT37O76014 449 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 TCP1P17987 556 aaKnown RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 RAP1GAPP47736 663 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 GCLMP48507 274 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 PXNP49023 591 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 GPR15P49685 360 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 LIMK1P53667 647 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 CLDN10P78369 228 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 APBA1Q02410 837 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 SURF1Q15526 300 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ALKBH5Q6P6C2 394 aaKnown RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ZNF571Q7Z3V5 609 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 CAMKK1Q8N5S9 505 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms