RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 NXNQ6DKJ4 435 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 KCNV1Q6PIU1 500 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 ARHGEF18Q6ZSZ5 1173 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
ATXN3-220ENST00000553491 GPR155Q7Z3F1 870 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 TCEAL8Q8IYN2 117 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 SAMD3Q8N6K7 520 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 FAM184AQ8NB25 1140 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 IL31RAQ8NI17 732 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 BICD2Q8TD16 824 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 TSPEARQ8WU66 669 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 AFG1LQ8WV93 481 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 AUTS2Q8WXX7 1259 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 HSPBAP1Q96EW2 488 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 SPATA33Q96N06 139 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 PDCD2LQ9BRP1 358 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 RIC8AQ9NPQ8 531 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 SMPD4Q9NXE4 827 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 BARHL2Q9NY43 387 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 KCMF1Q9P0J7 381 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 ORC3Q9UBD5 711 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-220ENST00000553491 USP18Q9UMW8 372 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 KCNJ14Q9UNX9 436 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 GIT1Q9Y2X7 761 aa5.27□□□□□ -1.57
ATXN3-220ENST00000553491 TNRC18O15417 2968 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 LOC102724159A0A0B4J2E5 919 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ADAMTS3O15072 1205 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 CUTAO60888 179 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 MAFO75444 373 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ARIH2O95376 493 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 LARGE1O95461 756 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 FOSP01100 380 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 MTHFD2P13995 350 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 CDK17Q00537 523 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 SP2Q02086 613 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 TLE2Q04725 743 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ITGA7Q13683 1181 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ICAM4Q14773 271 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 PWP2Q15269 919 aaKnown RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 GLB1LQ6UWU2 654 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 PLA2G4DQ86XP0 818 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 BLIDQ8IZY5 108 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 KLHDC9Q8NEP7 349 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 CCDC148Q8NFR7 591 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 OR14C36Q8NHC7 312 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 WDR48Q8TAF3 677 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 TTC8Q8TAM2 541 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 RSAD2Q8WXG1 361 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 WASF1Q92558 559 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ZSCAN31Q96LW9 406 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 MTG1Q9BT17 334 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 RNF26Q9BY78 433 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 AGXT2Q9BYV1 514 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 GLT8D2Q9H1C3 349 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 ALDH8A1Q9H2A2 487 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-220ENST00000553491 IFT122Q9HBG6 1241 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 GJB4Q9NTQ9 266 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 MAGEL2Q9UJ55 1249 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 TUBD1Q9UJT1 453 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 PCDHB6Q9Y5E3 794 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 TET1Q8NFU7 2136 aa5.26□□□□□ -1.57
ATXN3-220ENST00000553491 SCN10AQ9Y5Y9 1956 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 MYH15Q9Y2K3 1946 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 A0A0A6YYK5 440 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 A0A0U1RQG5 324 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 NPEPPSL1A6NEC2 478 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 PATE3B3GLJ2 98 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 JAK2O60674 1132 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 NDUFS2O75306 463 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 CABYRO75952 493 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 IL33O95760 270 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ZNF286BP0CG31 522 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ARP10275 920 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 TGFB3P10600 412 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ZNF20P17024 532 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ADCY8P40145 1251 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ETV4P43268 484 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 RCAN1P53805 252 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 EVCP57679 992 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 NEDD9Q14511 834 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 USP10Q14694 798 aaKnown RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 MLC1Q15049 377 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 EIF4HQ15056 248 aaKnown RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 RABEP1Q15276 862 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 SAFBQ15424 915 aaKnown RBP eCLIP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 DGKDQ16760 1214 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 WDR72Q3MJ13 1102 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 PRR16Q569H4 304 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 CELF3Q5SZQ8 465 aaKnown RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 TRIM68Q6AZZ1 485 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 GAREM2Q75VX8 874 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 BMP8AQ7Z5Y6 402 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 BCL6BQ8N143 479 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-220ENST00000553491 FBXL16Q8N461 479 aa5.25□□□□□ -1.57
ATXN3-220ENST00000553491 ZNF713Q8N859 430 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms