RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CYP24A1Q07973 514 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 GRIK2Q13002 908 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 SLC14A1Q13336 389 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 PSMD6Q15008 389 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 SNRNP35Q16560 246 aaKnown RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 SNX30Q5VWJ9 437 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 SDE2Q6IQ49 451 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 KIAA1324Q6UXG2 1013 aaKnown RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 CCNI2Q6ZMN8 369 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 CCDC73Q6ZRK6 1079 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 TPGS1Q6ZTW0 290 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 PAQR9Q6ZVX9 377 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 CCDC65Q8IXS2 484 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 PDILTQ8N807 584 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 MDM1Q8TC05 714 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 ELMO3Q96BJ8 720 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 CCDC127Q96BQ5 260 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 ZNF419Q96HQ0 510 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 BBS2Q9BXC9 721 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 NACA2Q9H009 215 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 XYLT2Q9H1B5 865 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 FAM124BQ9H5Z6 455 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 CCDC86Q9H6F5 360 aaKnown RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 KIAA1586Q9HCI6 787 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 DMAP1Q9NPF5 467 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 AGPAT3Q9NRZ7 376 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 KRT82Q9NSB4 513 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 IL37Q9NZH6 218 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-209ENST00000553308 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
SYNE2-209ENST00000553308 FASNP49327 2511 aaKnown RBP9.61□□□□□ -0.87
SYNE2-209ENST00000553308 ATP8B3O60423 1300 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 FAM92AA1XBS5 289 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 CLIC2O15247 247 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 TGFB1I1O43294 461 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 TLR5O60602 858 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 CBFA2T3O75081 653 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 AP1G2O75843 785 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 BEST1O76090 585 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 TBX18O95935 607 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 GNSP15586 552 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 CYP2J2P51589 502 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 CDH8P55286 799 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 TRPC3Q13507 836 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SYCP2LQ5T4T6 812 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 STXBP4Q6ZWJ1 553 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 HTR3DQ70Z44 454 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SLCO6A1Q86UG4 719 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 ZCCHC9Q8N567 271 aaKnown RBP9.61□□□□□ -0.87
SYNE2-209ENST00000553308 ZMIZ2Q8NF64 920 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SCFD1Q8WVM8 642 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 BHMTQ93088 406 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 P2RY11Q96G91 374 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SMARCD1Q96GM5 515 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SMOQ99835 787 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-209ENST00000553308 SDCBP2Q9H190 292 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 IL21RQ9HBE5 538 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 RAXQ9Y2V3 346 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 WDFY3Q8IZQ1 3526 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 DMXL2Q8TDJ6 3036 aa9.61□□□□□ -0.87
SYNE2-209ENST00000553308 MEI4A8MW99 385 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 CLSTN1O94985 981 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 STAU1O95793 577 aaKnown RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 CISD3P0C7P0 127 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 CCDC130P13994 396 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 CD6P30203 668 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 DGKGP49619 791 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 CASP4P49662 377 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 ORC1Q13415 861 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 FUT11Q495W5 492 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 WDR45BQ5MNZ6 344 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 EPM2AIP1Q7L775 607 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 GLRX5Q86SX6 157 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 ACOT1Q86TX2 421 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 NELFCDQ8IXH7 590 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 HNRNPLLQ8WVV9 542 aaKnown RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 TOE1Q96GM8 510 aaKnown RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 GPR174Q9BXC1 333 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 OSER1Q9NX31 292 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 PLK2Q9NYY3 685 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 PCOLCE2Q9UKZ9 415 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 APOBEC2Q9Y235 224 aaKnown RBP9.6□□□□□ -0.87
SYNE2-209ENST00000553308 FNDC3AQ9Y2H6 1198 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms