RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PPP6R2O75170 966 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 RPS6KA4O75676 772 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 BAIAP3O94812 1187 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 ZFPL1O95159 310 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 LMNAP02545 664 aaKnown RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CFIP05156 583 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CNPP09543 421 aaKnown RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 IFIT1P09914 478 aaKnown RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 C6P13671 934 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 RXRAP19793 462 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 ADORA2AP29274 412 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 HTR7P34969 479 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 MCM2P49736 904 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 SCNN1GP51170 649 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CXADRP78310 365 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CLCA4Q14CN2 919 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 R3HDM1Q15032 1099 aaKnown RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 RPS6KA2Q15349 733 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CYP2A13Q16696 494 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 PREPLQ4J6C6 727 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 SP5Q6BEB4 398 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 Q6ZRM9 215 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 GDF7Q7Z4P5 450 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 TBC1D1Q86TI0 1168 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 TRABD2AQ86V40 505 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 BOD1Q96IK1 185 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 OSBPL5Q9H0X9 879 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 CHODLQ9H9P2 273 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 UNKLQ9H9P5 680 aaKnown RBP5.73□□□□□ -1.49
SCFD1-209ENST00000553280 NOD2Q9HC29 1040 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 SERTAD3Q9UJW9 196 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 SLC27A6Q9Y2P4 619 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 DERAQ9Y315 318 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 SNX14Q9Y5W7 946 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 ZAR1LA6NP61 321 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 GRXCR1A8MXD5 290 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 AHRRA9YTQ3 701 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 RPP40O75818 363 aaKnown RBP5.72□□□□□ -1.49
SCFD1-209ENST00000553280 KRT38O76015 456 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 RECQL4O94761 1208 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 CER1O95813 267 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 TFRCP02786 760 aaKnown RBP5.72□□□□□ -1.49
SCFD1-209ENST00000553280 HSP90AA1P07900 732 aaKnown RBP5.72□□□□□ -1.49
SCFD1-209ENST00000553280 COMTP21964 271 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 GATA3P23771 443 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 SERPINA4P29622 427 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 TIRAPP58753 221 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 ACOX1Q15067 660 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 MSANTD2Q6P1R3 559 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 CLEC9AQ6UXN8 241 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 IZUMO1Q8IYV9 350 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 USP38Q8NB14 1042 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 CEP70Q8NHQ1 597 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 OSCP1Q8WVF1 389 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 ATRIPQ8WXE1 791 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 GOLGA1Q92805 767 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 NACC2Q96BF6 587 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 FAM136AQ96C01 138 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 FAM89AQ96GI7 184 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 ADOQ96SZ5 270 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 PAAF1Q9BRP4 392 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 C17orf80Q9BSJ5 609 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 VN1R3Q9BXE9 311 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 ALG13Q9NP73 1137 aaKnown RBP5.72□□□□□ -1.49
SCFD1-209ENST00000553280 TMEM74BQ9NUR3 256 aa5.72□□□□□ -1.49
SCFD1-209ENST00000553280 RNASEH2AO75792 299 aaKnown RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 LARGE1O95461 756 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 ANKRD1Q15327 319 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 GALNTL6Q49A17 601 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 HS1BP3Q53T59 392 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 DEPDC1Q5TB30 811 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 FSTL5Q8N475 847 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 ZNF808Q8N4W9 903 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 SLC16A11Q8NCK7 471 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 TMEM125Q96AQ2 219 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 RRP36Q96EU6 259 aaKnown RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 HAPLN3Q96S86 360 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 GPR63Q9BZJ6 419 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 SCAND2PQ9GZW5 306 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 ABHD16BQ9H3Z7 469 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 PREBQ9HCU5 417 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 INTS13Q9NVM9 706 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 TRPM5Q9NZQ8 1165 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 KCND3Q9UK17 655 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 RIMKLBQ9ULI2 386 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 SORCS3Q9UPU3 1222 aa5.71□□□□□ -1.5
SCFD1-209ENST00000553280 RRP7AQ9Y3A4 280 aaKnown RBP5.71□□□□□ -1.5
SCFD1-209ENST00000553280 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 FAM90A20PA6NIJ5 464 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 MARCH11A6NNE9 402 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 KIF28PB7ZC32 967 aa5.7□□□□□ -1.5
SCFD1-209ENST00000553280 SCAF4O95104 1147 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 DDX58O95786 925 aaKnown RBP5.7□□□□□ -1.5
SCFD1-209ENST00000553280 CD19P15391 556 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms