RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 K7ESF4 209 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 MDM4O15151 490 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 NFATC1O95644 943 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 EGFP01133 1207 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 HOXC13P31276 330 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 GPD2P43304 727 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 MEA1Q16626 185 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 EXOC3L4Q17RC7 722 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 VWA3BQ502W6 1294 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 C11orf57Q6ZUT1 292 aaPredicted RBP20.27■□□□□ 0.84
PTCH1-227ENST00000553256 ENOSF1Q7L5Y1 443 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 BBS7Q8IWZ6 715 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 PHTF2Q8N3S3 785 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 TUBGCP2Q9BSJ2 902 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 ULBP1Q9BZM6 244 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 HSD3B7Q9H2F3 369 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 NDST4Q9H3R1 872 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 ACP6Q9NPH0 428 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.84
PTCH1-227ENST00000553256 FRYLO94915 3013 aa20.27■□□□□ 0.83
PTCH1-227ENST00000553256 A0A0A0MRY4 1105 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 ANTXRLA6NF34 631 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 SLC9A3R1O14745 358 aaPredicted RBP20.26■□□□□ 0.83
PTCH1-227ENST00000553256 LAMTOR5O43504 91 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 LILRB5O75023 590 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 ZBED1O96006 694 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 ATP5C1P36542 298 aaKnown RBP20.26■□□□□ 0.83
PTCH1-227ENST00000553256 SATB1Q01826 763 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 LRRC32Q14392 662 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 STILQ15468 1287 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 ALYREFQ86V81 257 aaKnown RBP20.26■□□□□ 0.83
PTCH1-227ENST00000553256 C12orf40Q86WS4 652 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 ETFBKMTQ8IXQ9 262 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
PTCH1-227ENST00000553256 OTUB2Q96DC9 234 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 P2RY13Q9BPV8 354 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 TBC1D14Q9P2M4 693 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 NAGPAQ9UK23 515 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 NFE2L3Q9Y4A8 694 aa20.26■□□□□ 0.83
PTCH1-227ENST00000553256 GVINP1Q7Z2Y8 2422 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 OTOGLQ3ZCN5 2332 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 YJEFN3A6XGL0 299 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 CHURC1-FNTBB4DL54 471 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 E7ENQ6 273 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 MBD3O95983 291 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 KLKB1P03952 638 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 MTIF2P46199 727 aaKnown RBP20.25■□□□□ 0.83
PTCH1-227ENST00000553256 KCNJ12Q14500 433 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 NCAPHQ15003 741 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 HSP90AA4PQ58FG1 418 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 TCP11X2Q5H9J9 407 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 TSSK4Q6SA08 328 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 ASCL5Q7RTU5 278 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 FAM114A1Q8IWE2 563 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 NAA15Q9BXJ9 866 aaKnown RBP20.25■□□□□ 0.83
PTCH1-227ENST00000553256 HESX1Q9UBX0 185 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 CYTH4Q9UIA0 394 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 DNMT3LQ9UJW3 386 aa20.25■□□□□ 0.83
PTCH1-227ENST00000553256 ZNF292O60281 2723 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 HOXC11O43248 304 aaPredicted RBP20.24■□□□□ 0.83
PTCH1-227ENST00000553256 STC2O76061 302 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 DRD1P21728 446 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 EEF1GP26641 437 aaKnown RBP20.24■□□□□ 0.83
PTCH1-227ENST00000553256 EIF2DP41214 584 aaKnown RBP20.24■□□□□ 0.83
PTCH1-227ENST00000553256 DAOAP59103 153 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 YWHAGP61981 247 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTCH1-227ENST00000553256 AMPD2Q01433 879 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 ADIGQ0VDE8 80 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 ZNF606Q8WXB4 792 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 CD101Q93033 1021 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 HSFY1Q96LI6 401 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 CNGB3Q9NQW8 809 aa20.24■□□□□ 0.83
PTCH1-227ENST00000553256 CFAP54Q96N23 3096 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 PRR23AA6NEV1 266 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 GOLGA6L22H0YM25 854 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 K7EQS6 105 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 FYNP06241 537 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 HOXA6P31267 233 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 SLC6A11P48066 632 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 CCR3P51677 355 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 MFAP3P55082 362 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 SLC8A3P57103 927 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 CSTF1Q05048 431 aaKnown RBP20.23■□□□□ 0.83
PTCH1-227ENST00000553256 GRSF1Q12849 480 aaKnown RBP eCLIP20.23■□□□□ 0.83
PTCH1-227ENST00000553256 C10orf120Q5SQS8 335 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 LY6G5CQ5SRR4 150 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 CCDC183Q5T5S1 534 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 DENND1BQ6P3S1 775 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 APTXQ7Z2E3 356 aaKnown RBP20.23■□□□□ 0.83
PTCH1-227ENST00000553256 TMEM25Q86YD3 366 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 SFTPA1Q8IWL2 248 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 ARHGAP18Q8N392 663 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 WDTC1Q8N5D0 677 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 FAM81BQ96LP2 452 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 SLC4A5Q9BY07 1137 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 MARK1Q9P0L2 795 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 R4GN57 208 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 MYOFQ9NZM1 2061 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms