RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 FMO5P49326 533 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 STX17P56962 302 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 MORC3Q14149 939 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 RSPO4Q2I0M5 234 aaPredicted RBP16.73■□□□□ 0.27
CDK4-215ENST00000553237 EMC10Q5UCC4 262 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 BTBD8Q5XKL5 378 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 KBTBD6Q86V97 674 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 PIGZQ86VD9 579 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 CCDC26Q8TAB7 109 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
CDK4-215ENST00000553237 SPHK2Q9NRA0 654 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDK4-215ENST00000553237 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 USP3Q9Y6I4 520 aa16.73■□□□□ 0.27
CDK4-215ENST00000553237 CEP250Q9BV73 2442 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 GREM1O60565 184 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 CD19P15391 556 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 EIF2DP41214 584 aaKnown RBP16.72■□□□□ 0.27
CDK4-215ENST00000553237 GRIA2P42262 883 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 PLA2G4AP47712 749 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 GOLGA7BQ2TAP0 167 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 TPGS1Q6ZTW0 290 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 HTR3DQ70Z44 454 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 TTC30AQ86WT1 665 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 MIB1Q86YT6 1006 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 ALLCQ8N6M5 410 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 ANKRD52Q8NB46 1076 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 ZDHHC4Q9NPG8 344 aa16.72■□□□□ 0.27
CDK4-215ENST00000553237 LSM7Q9UK45 103 aaKnown RBP16.72■□□□□ 0.27
CDK4-215ENST00000553237 TBC1D3BA6NDS4 549 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 TULP2O00295 520 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 DCLK1O15075 740 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 TRIM24O15164 1050 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 KLF8O95600 359 aaPredicted RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 RALAP11233 206 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 DGKEP52429 567 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 SLC8A3P57103 927 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 YWHAEP62258 255 aaKnown RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 MRPS21P82921 87 aaKnown RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 SGO2Q562F6 1265 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 CACNA2D4Q7Z3S7 1137 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 TSTD1Q8NFU3 115 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 UBA3Q8TBC4 463 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 NDRG1Q92597 394 aaKnown RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 UBXN6Q9BZV1 441 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 FAM124BQ9H5Z6 455 aaPredicted RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 DEC1Q9P2X7 70 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 RASAL2Q9UJF2 1139 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 TSPAN16Q9UKR8 245 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 MMP17Q9ULZ9 603 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 INVSQ9Y283 1065 aa16.71■□□□□ 0.27
CDK4-215ENST00000553237 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
CDK4-215ENST00000553237 MYO16Q9Y6X6 1858 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 A0A0A0MRY4 1105 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TULP3O75386 442 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 HMBSP08397 361 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
CDK4-215ENST00000553237 PSEN1P49768 467 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TKTL1P51854 596 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 LMNB2Q03252 620 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 PDE4CQ08493 712 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 EFEMP1Q12805 493 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 PUM1Q14671 1186 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDK4-215ENST00000553237 CCDC6Q16204 474 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 CAMK4Q16566 473 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 ANO7Q6IWH7 933 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 KLHDC10Q6PID8 442 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TMEM92Q6UXU6 159 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TADA2BQ86TJ2 420 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 ETFBKMTQ8IXQ9 262 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 PHTF2Q8N3S3 785 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 UBR7Q8N806 425 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 IL17RCQ8NAC3 791 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TXNDC5Q8NBS9 432 aaKnown RBP16.7■□□□□ 0.26
CDK4-215ENST00000553237 KAT5Q92993 513 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 NT5C1BQ96P26 610 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 TPSD1Q9BZJ3 242 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 ARRDC1-AS1Q9H2J1 176 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 DLL3Q9NYJ7 618 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 CLIC5Q9NZA1 410 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 PCDHB4Q9Y5E5 795 aa16.7■□□□□ 0.26
CDK4-215ENST00000553237 NEDD8-MDP1E9PL57 170 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 SGK1O00141 431 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 STC2O76061 302 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 VDRP11473 427 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 HNRNPLP14866 589 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDK4-215ENST00000553237 TNFRSF4P43489 277 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 KIR2DL1P43626 348 aaPredicted RBP16.69■□□□□ 0.26
CDK4-215ENST00000553237 BCAT1P54687 386 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 PAK1Q13153 545 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 CRY1Q16526 586 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms