RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 STK4Q13043 487 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 PNOCQ13519 176 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 BTBD8Q5XKL5 378 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 PIP4P1Q86T03 277 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 NELFCDQ8IXH7 590 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
CKAP4-202ENST00000552828 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 PLEKHO2Q8TD55 490 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 TNIP3Q96KP6 325 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 NUSAP1Q9BXS6 441 aaKnown RBP12.54□□□□□ -0.4
CKAP4-202ENST00000552828 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 CD248Q9HCU0 757 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 DMAP1Q9NPF5 467 aaPredicted RBP12.54□□□□□ -0.4
CKAP4-202ENST00000552828 SPHK2Q9NRA0 654 aa12.54□□□□□ -0.4
CKAP4-202ENST00000552828 BCCIPQ9P287 314 aaKnown RBP eCLIP12.54□□□□□ -0.4
CKAP4-202ENST00000552828 DSPP15924 2871 aaKnown RBP12.53□□□□□ -0.4
CKAP4-202ENST00000552828 DMXL2Q8TDJ6 3036 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 A0A1W2PQF6 199 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 RHOBTB3O94955 611 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 KIF20AO95235 890 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 C4BPAP04003 597 aaKnown RBP12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ENGP17813 658 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 GABRG2P18507 467 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 CASP4P49662 377 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
CKAP4-202ENST00000552828 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
CKAP4-202ENST00000552828 UAP1L1Q3KQV9 507 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 LYSMD4Q5XG99 296 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 CRYBG2Q8N1P7 616 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ZNF513Q8N8E2 541 aaPredicted RBP12.53□□□□□ -0.4
CKAP4-202ENST00000552828 NAT16Q8N8M0 369 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 TERB1Q8NA31 727 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 KIAA0895Q8NCT3 520 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 DEFB124Q8NES8 71 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 CEP76Q8TAP6 659 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 PARD3BQ8TEW8 1205 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 GATA6Q92908 595 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 WBP2Q969T9 261 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ZDHHC4Q9NPG8 344 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 DMAC2Q9NW81 257 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 GMIPQ9P107 970 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 ZMIZ1Q9ULJ6 1067 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 LAMA5O15230 3695 aa12.53□□□□□ -0.4
CKAP4-202ENST00000552828 NUP205Q92621 2012 aa12.52□□□□□ -0.4
CKAP4-202ENST00000552828 AP5Z1O43299 807 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 EXOC3O60645 756 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 PHACTR2O75167 634 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 AP1G2O75843 785 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 VNN1O95497 513 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SERPINF2P08697 491 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 ITPKAP23677 461 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 NTSR1P30989 418 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 PGFP49763 221 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 NCOA4Q13772 614 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SLC36A4Q6YBV0 504 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 ARMCX6Q7L4S7 300 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 MIB1Q86YT6 1006 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 PGBD3Q8N328 593 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 GSDMAQ96QA5 445 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SMOQ99835 787 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SDCBP2Q9H190 292 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 FBXO44Q9H4M3 255 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SLC32A1Q9H598 525 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 ATRXP46100 2492 aa12.52□□□□□ -0.41
CKAP4-202ENST00000552828 CACNA1GO43497 2377 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 THADAQ6YHU6 1953 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
CKAP4-202ENST00000552828 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 TRIM24O15164 1050 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 CACNG3O60359 315 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 TLR5O60602 858 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 BEST1O76090 585 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 SPINK2P20155 84 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 MAPK8P45983 427 aa12.51□□□□□ -0.41
CKAP4-202ENST00000552828 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms