RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 DAOAP59103 153 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 HTRA3P83110 453 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 SCAPQ12770 1279 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ELAVL2Q12926 359 aaKnown RBP10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ERMARDQ5T6L9 678 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 SLC9A4Q6AI14 798 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 TXNRD3NBQ6F5E7 133 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 OVOS1Q6IE37 1185 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 VSTM1Q6UX27 236 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ZDHHC24Q6UX98 284 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 BHLHA9Q7RTU4 235 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 PHLDB2Q86SQ0 1253 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ZNF280BQ86YH2 543 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 NPAS4Q8IUM7 802 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 CCDC89Q8N998 374 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 BBOF1Q8ND07 529 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 NTAN1Q96AB6 310 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 LRRC45Q96CN5 670 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 THAP11Q96EK4 314 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 PIWIL1Q96J94 861 aaKnown RBP10.26□□□□□ -0.77
TMEM116-216ENST00000552800 C8orf48Q96LL4 319 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 RNF157Q96PX1 679 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ZNF670Q9BS34 389 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 TRIM62Q9BVG3 475 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 MRPL9Q9BYD2 267 aaKnown RBP10.26□□□□□ -0.77
TMEM116-216ENST00000552800 ZCWPW1Q9H0M4 648 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 NRDE2Q9H7Z3 1164 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 FAM49BQ9NUQ9 324 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.26□□□□□ -0.77
TMEM116-216ENST00000552800 HSFX1Q9UBD0 423 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 PCDHB7Q9Y5E2 793 aa10.26□□□□□ -0.77
TMEM116-216ENST00000552800 MICAL3Q7RTP6 2002 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 CASTOR2A6NHX0 329 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 OR6C75A6NL08 312 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 GOLGA8SH3BPF8 625 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 APOC4-APOC2K7ER74 178 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 AGPSO00116 658 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 HCRTO43612 131 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 EFCAB14O75071 495 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 F9P00740 461 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 IGLV3-25P01717 112 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 APOC2P02655 101 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 DNA2P51530 1060 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 ADCY2Q08462 1091 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 XRCC4Q13426 336 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 BYSLQ13895 437 aaKnown RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 TFDP2Q14188 446 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 TRADDQ15628 312 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 NFE2Q16621 373 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 QPCTQ16769 361 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 PTPROQ16827 1216 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 BRICD5Q6PL45 260 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 LRIG3Q6UXM1 1119 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 C4orf50Q6ZRC1 276 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 CTU1Q7Z7A3 348 aaKnown RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 LRRTM3Q86VH5 581 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 KRT222Q8N1A0 295 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 EMC1Q8N766 993 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 C2orf15Q8WU43 125 aaKnown RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 ZNF689Q96CS4 500 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 RTP4Q96DX8 246 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 PEBP4Q96S96 227 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 SPSB2Q99619 263 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 TMEM109Q9BVC6 243 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 COLEC11Q9BWP8 271 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 ACBD3Q9H3P7 528 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 POPDC2Q9HBU9 364 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 ST7Q9NRC1 585 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 MTMR10Q9NXD2 777 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 NFU1Q9UMS0 254 aa10.25□□□□□ -0.77
TMEM116-216ENST00000552800 SF3B1O75533 1304 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM116-216ENST00000552800 LTBP2Q14767 1821 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 ABHD14A-ACY1A0A1B0GW23 586 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 ZSCAN5CA6NGD5 496 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 H0YGN5 161 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 KIAA0355O15063 1070 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 DAPK3O43293 454 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 PRPSAP2O60256 369 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 B4GALT3O60512 393 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 ECEL1O95672 775 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 SYF2O95926 243 aaKnown RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 GAS8O95995 478 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 GALTP07902 379 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 RARGP13631 454 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 ZFXP17010 805 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 TGM2P21980 687 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 L1CAMP32004 1257 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 BRCC3P46736 316 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 VCPP55072 806 aaKnown RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 TLE2Q04725 743 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 YWHAHQ04917 246 aaPredicted RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 GPS2Q13227 327 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 DPYSL3Q14195 570 aa10.24□□□□□ -0.77
TMEM116-216ENST00000552800 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
TMEM116-216ENST00000552800 TAF5Q15542 800 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms