RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 PTPN20Q4JDL3 420 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 E4F1Q66K89 784 aaPredicted RBP13.77□□□□□ -0.21
CDK4-212ENST00000552388 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 FBXL6Q8N531 539 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 CELF5Q8N6W0 485 aaKnown RBP13.77□□□□□ -0.21
CDK4-212ENST00000552388 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 NDRG1Q92597 394 aaKnown RBP13.77□□□□□ -0.21
CDK4-212ENST00000552388 USP13Q92995 863 aaPredicted RBP13.77□□□□□ -0.21
CDK4-212ENST00000552388 RSPRY1Q96DX4 576 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 MRFAP1L1Q96HT8 127 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 CPXM1Q96SM3 734 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 AGPAT1Q99943 283 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 KXD1Q9BQD3 176 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 SYT11Q9BT88 431 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 PLA2G2FQ9BZM2 168 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 NAGPAQ9UK23 515 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.21
CDK4-212ENST00000552388 LUC7L2Q9Y383 392 aaKnown RBP13.77□□□□□ -0.21
CDK4-212ENST00000552388 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 HEPACAM2A8MVW5 462 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 E7ENQ6 273 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 SART1O43290 800 aaKnown RBP13.76□□□□□ -0.21
CDK4-212ENST00000552388 COCHO43405 550 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 RALAP11233 206 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 UNGP13051 313 aaPredicted RBP13.76□□□□□ -0.21
CDK4-212ENST00000552388 RARGP13631 454 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 GABRB2P47870 512 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 SNX16P57768 344 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 SIGLEC14Q08ET2 396 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 VITQ6UXI7 678 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 MFSD6LQ8IWD5 586 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 SLC44A3Q8N4M1 653 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 ST13P5Q8NFI4 369 aaPredicted RBP13.76□□□□□ -0.21
CDK4-212ENST00000552388 CLEC4CQ8WTT0 213 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
CDK4-212ENST00000552388 PCDHB18PQ96TA0 734 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 MIS12Q9H081 205 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 SMG9Q9H0W8 520 aaKnown RBP13.76□□□□□ -0.21
CDK4-212ENST00000552388 ABCC13Q9NSE7 274 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 CCL26Q9Y258 94 aa13.76□□□□□ -0.21
CDK4-212ENST00000552388 DPYSL4O14531 572 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ERBB2P04626 1255 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 MBL2P11226 248 aaPredicted RBP13.75□□□□□ -0.21
CDK4-212ENST00000552388 PSMC3P17980 439 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ATP5C1P36542 298 aaKnown RBP13.75□□□□□ -0.21
CDK4-212ENST00000552388 ZNF75DP51815 510 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ZXDBP98169 803 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 CENPCQ03188 943 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 FCHO2Q0JRZ9 810 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ARID5BQ14865 1188 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 BSPRYQ5W0U4 402 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 BTBD8Q5XKL5 378 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 HGSNATQ68CP4 663 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ERICH1Q86X53 443 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 ZDHHC17Q8IUH5 632 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 OLIG1Q8TAK6 271 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
CDK4-212ENST00000552388 LRRC3BQ96PB8 259 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 DUSP12Q9UNI6 340 aa13.75□□□□□ -0.21
CDK4-212ENST00000552388 BZW2Q9Y6E2 419 aaKnown RBP13.75□□□□□ -0.21
CDK4-212ENST00000552388 TBX18O95935 607 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 LTFP02788 710 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 GLI1P08151 1106 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 HNRNPH3P31942 346 aaKnown RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 NUBP1P53384 320 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 USP4Q13107 963 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 ZNF77Q15935 545 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 FAM183BPQ6ZVS7 135 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 BEND5Q7L4P6 421 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 ZNF571Q7Z3V5 609 aaPredicted RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 TMC6Q7Z403 805 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 RIN3Q8TB24 985 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 GOLGA1Q92805 767 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 PBXIP1Q96AQ6 731 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 ZFRQ96KR1 1074 aaKnown RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 NACA2Q9H009 215 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 SLC2A4RGQ9NR83 387 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 OLA1Q9NTK5 396 aaKnown RBP13.74□□□□□ -0.21
CDK4-212ENST00000552388 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms