RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SCD5Q86SK9 330 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 RALGPS2Q86X27 583 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 FAM71AQ8IYT1 594 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 KIAA1958Q8N8K9 716 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 TMEM105Q8N8V8 129 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 PJA1Q8NG27 643 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NOX5Q96PH1 765 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 SPAG5Q96R06 1193 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 DDX23Q9BUQ8 820 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 STK33Q9BYT3 514 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 HPS4Q9NQG7 708 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 OSER1Q9NX31 292 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 RASAL2Q9UJF2 1139 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 LSM7Q9UK45 103 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NUDT5Q9UKK9 219 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 STRIP2Q9ULQ0 834 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NDRG2Q9UN36 371 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 COL4A2P08572 1712 aa19.39■□□□□ 0.7
PRPF40B-216ENST00000552301 FAM170BA6NMN3 283 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 SPECC1L-ADORA2AF8WAN1 911 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 PIK3R2O00459 728 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 FBXO21O94952 628 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 TBX18O95935 607 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 CTHP32929 405 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 SOX9P48436 509 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 KLK7P49862 253 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 IQCB1Q15051 598 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 DPY19L2P1Q6NXN4 242 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 RNF139Q8WU17 664 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 PRRX2Q99811 253 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 GANQ9H2C0 597 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 CBX8Q9HC52 389 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 NLRC4Q9NPP4 1024 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 TBC1D14Q9P2M4 693 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 SIK3Q9Y2K2 1263 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 KMT2EQ8IZD2 1858 aa19.39■□□□□ 0.69
PRPF40B-216ENST00000552301 E2F8A0AVK6 867 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 F8VZ95 297 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 SCAMP3O14828 347 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 MDM4O15151 490 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 SART1O43290 800 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 TRIOO75962 3097 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 SERPINC1P01008 464 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 TARSP26639 723 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 GPD2P43304 727 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 DAOAP59103 153 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 ZXDBP98169 803 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 EFEMP1Q12805 493 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 NFKBIBQ15653 356 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 EML3Q32P44 896 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 MIA3Q5JRA6 1907 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 MIB1Q86YT6 1006 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 PASD1Q8IV76 773 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 SCML4Q8N228 414 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 ZNF276Q8N554 614 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 IRGQQ8WZA9 623 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 NDRG1Q92597 394 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 EXOC4Q96A65 974 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 ZFRQ96KR1 1074 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 ERGIC2Q96RQ1 377 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 OSBPL6Q9BZF3 934 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 MIS12Q9H081 205 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 ECT2Q9H8V3 914 aa19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 OLA1Q9NTK5 396 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-216ENST00000552301 COL4A3Q01955 1670 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 PI15O43692 258 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 DCNP07585 359 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 CLCN1P35523 988 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 NUBP1P53384 320 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 PDCLQ13371 301 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 APTXQ7Z2E3 356 aaKnown RBP19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 LUZP1Q86V48 1076 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 STK32AQ8WU08 396 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 KLF16Q9BXK1 252 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 MARCH2Q9P0N8 246 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 PCDHGC3Q9UN70 934 aa19.37■□□□□ 0.69
PRPF40B-216ENST00000552301 YJEFN3A6XGL0 299 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 E7ENQ6 273 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 CYP11B1P15538 503 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 MAGEA9P43362 315 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 SNX16P57768 344 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 COG7P83436 770 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 BSPRYQ5W0U4 402 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 CACNA2D4Q7Z3S7 1137 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 IPO4Q8TEX9 1081 aaKnown RBP19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 FAM149B1Q96BN6 582 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 OTUB2Q96DC9 234 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 KCNH6Q9H252 994 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 LINC00597Q9H2U6 94 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 SYNCQ9H7C4 482 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 ABCC13Q9NSE7 274 aa19.36■□□□□ 0.69
PRPF40B-216ENST00000552301 GFPT2O94808 682 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 ADH1CP00326 375 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 LTFP02788 710 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 SOX5P35711 763 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 STAT1P42224 750 aa19.35■□□□□ 0.69
PRPF40B-216ENST00000552301 LRRC32Q14392 662 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms