RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 PQLC3Q8N755 202 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 FAM172AQ8WUF8 416 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 MMP19Q99542 508 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 TRIM56Q9BRZ2 755 aaKnown RBP13.55□□□□□ -0.24
CACNB3-219ENST00000551544 MECRQ9BV79 373 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 NT5C1AQ9BXI3 368 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 SLC13A1Q9BZW2 595 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 DPP3Q9NY33 737 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 TTLL3Q9Y4R7 772 aa13.55□□□□□ -0.24
CACNB3-219ENST00000551544 A6NHS1 94 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 UGT1A9O60656 530 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PFKMP08237 780 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 OSBPP22059 807 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SLC26A2P50443 739 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PRKD1Q15139 912 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 AMHR2Q16671 573 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 TTC39BQ5VTQ0 682 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PMF1Q6P1K2 205 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CCDC62Q6P9F0 684 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 RFWD3Q6PCD5 774 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 LCLAT1Q6UWP7 414 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PCDH19Q8TAB3 1148 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 ASB7Q9H672 318 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 KCNK13Q9HB14 408 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 ERAP1Q9NZ08 941 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 WDR90Q96KV7 1748 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 EIF4E1BA6NMX2 242 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SPAG6O75602 509 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CMPK2Q5EBM0 449 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PPP1R26Q5T8A7 1209 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 TRIM68Q6AZZ1 485 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 MICAL1Q8TDZ2 1067 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SNRNP25Q9BV90 132 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CADM1Q9BY67 442 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 MIS12Q9H081 205 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 KLC2Q9H0B6 622 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PCDH18Q9HCL0 1135 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 ETNK2Q9NVF9 386 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 LNPEPQ9UIQ6 1025 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 FAM237BA0A1B0GVD1 139 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 KRT37O76014 449 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 MYL2P10916 166 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 GNAZP19086 355 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SDC4P31431 198 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 RBP5P82980 135 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CDK16Q00536 496 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 PDK2Q15119 407 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 BOLA3Q53S33 107 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SPDYAQ5MJ70 313 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CAND1Q86VP6 1230 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 CLMNQ96JQ2 1002 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 POPDC2Q9HBU9 364 aa13.54□□□□□ -0.24
CACNB3-219ENST00000551544 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 MTO1Q9Y2Z2 717 aaKnown RBP13.54□□□□□ -0.24
CACNB3-219ENST00000551544 POLR2AP24928 1970 aaKnown RBP13.53□□□□□ -0.24
CACNB3-219ENST00000551544 CCDC195A0A1B0GUA6 201 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 CCDC22O60826 627 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 SLC25A27O95847 323 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 SNRPAP09012 282 aaKnown RBP13.53□□□□□ -0.24
CACNB3-219ENST00000551544 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 NAF1Q96HR8 494 aaKnown RBP13.53□□□□□ -0.24
CACNB3-219ENST00000551544 NSL1Q96IY1 281 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 SMYD2Q9NRG4 433 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 RBPJLQ9UBG7 517 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 LRRC42Q9Y546 428 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 GYG2O15488 501 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 TFE3P19532 575 aaPredicted RBP13.53□□□□□ -0.24
CACNB3-219ENST00000551544 TGM2P21980 687 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 ABL2P42684 1182 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 MAGEB5Q9BZ81 275 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 CNTN3Q9P232 1028 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 ARMCX1Q9P291 453 aa13.53□□□□□ -0.24
CACNB3-219ENST00000551544 MCM3APO60318 1980 aa13.52□□□□□ -0.24
CACNB3-219ENST00000551544 F5H423 210 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms