RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SLC6A15Q9H2J7 730 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 RANBP17Q9H2T7 1088 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 HIPK3Q9H422 1215 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 RAVER2Q9HCJ3 691 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 IL1RAPL2Q9NP60 686 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 SARS2Q9NP81 518 aaKnown RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 JADE2Q9NQC1 790 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 STARD7Q9NQZ5 370 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LANCL2Q9NS86 450 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PNPOQ9NVS9 261 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 MCM9Q9NXL9 1143 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ING3Q9NXR8 418 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CALCOCO1Q9P1Z2 691 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ANAPC4Q9UJX5 808 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 ADAM29Q9UKF5 820 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 L1RE1Q9UN81 338 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CTDP1Q9Y5B0 961 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-207ENST00000551516 PCDHB1Q9Y5F3 818 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 CEP250Q9BV73 2442 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 FAM186AA6NE01 2351 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 OTOGLQ3ZCN5 2332 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LCTP09848 1927 aa2.74□□□□□ -1.97
CPSF6-207ENST00000551516 LOC102724159A0A0B4J2E5 919 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 LINC01553A4QN01 128 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CFAP69A5D8W1 941 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MROH6A6NGR9 719 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 C9orf118A6NHY6 69 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 A6NNZ2 444 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PROB1E7EW31 1015 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 C5orf67F2Z3F1 127 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CCER2I3L3R5 266 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TEX33O43247 280 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MTSS1O43312 755 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 NMT2O60551 498 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ITGA10O75578 1167 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CABYRO75952 493 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TOX4O94842 621 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MBD4O95243 580 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 GJB5O95377 273 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 LDHAP00338 332 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 VSIG10L2P0DP72 767 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 DDCP20711 480 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SMARCA1P28370 1054 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CSF2RBP32927 897 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PTPN7P35236 360 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 COPB2P35606 906 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SREBF1P36956 1147 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ZEB1P37275 1124 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 AFF3P51826 1226 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 AK2P54819 239 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CCL23P55773 120 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 BPIFB4P59827 614 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 WDR5P61964 334 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ATP2C1P98194 919 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SP2Q02086 613 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ARHGAP1Q07960 439 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SP140Q13342 867 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SEMA5AQ13591 1074 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MORC3Q14149 939 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 GALEQ14376 348 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SSPNQ14714 243 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PWP2Q15269 919 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ALX1Q15699 326 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 RAB30Q15771 203 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 GAGE13Q4V321 117 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 VWA3BQ502W6 1294 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 HERC4Q5GLZ8 1057 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 CCDC158Q5M9N0 1113 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ZKSCAN2Q63HK3 967 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SNRNP48Q6IEG0 339 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 NFRKBQ6P4R8 1299 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PSRC1Q6PGN9 363 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 Q6ZVL8 140 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 GPR155Q7Z3F1 870 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 RALYLQ86SE5 291 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TLK2Q86UE8 772 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 AACSQ86V21 672 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 FAM124AQ86V42 546 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM151BQ8IW70 566 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SMC5Q8IY18 1101 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 EXOC8Q8IYI6 725 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ANKRD53Q8N9V6 530 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 KBTBD3Q8NAB2 608 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PCSK9Q8NBP7 692 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PRSS33Q8NF86 280 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 BHLHE22Q8NFJ8 381 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 OR5M3Q8NGP4 307 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 OTUD7AQ8TE49 926 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ADAMTS17Q8TE56 1095 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 NUP133Q8WUM0 1156 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 LRTOMTQ8WZ04 291 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF689Q96CS4 500 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MSLNLQ96KJ4 702 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 RPL10LQ96L21 214 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SNX27Q96L92 541 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MRGPRX4Q96LA9 322 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 GLT1D1Q96MS3 346 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 VRK1Q99986 396 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SLF1Q9BQI6 1058 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 C16orf70Q9BSU1 422 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms