RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 KLF16Q9BXK1 252 aaPredicted RBP15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 NACA2Q9H009 215 aa15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 OBP2AQ9NY56 170 aa15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 LUC7L2Q9Y383 392 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.9■□□□□ 0.141e-8■□□□□ 10.2
SMARCD1-211ENST00000551497 NUP210Q8TEM1 1887 aaPredicted RBP15.9■□□□□ 0.14
SMARCD1-211ENST00000551497 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 LEFTY2O00292 366 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 FBXO21O94952 628 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 FYNP06241 537 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 CCDC172P0C7W6 258 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 SRFP11831 508 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 COL9A1P20849 921 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 TNFAIP3P21580 790 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 NOMO3P69849 1222 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 ZBED6P86452 979 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 GOLGA8FQ08AF8 430 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 GOLGA8DPQ0D2H9 430 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 EFEMP1Q12805 493 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 OR6B2Q6IFH4 312 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 ERICH1Q86X53 443 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 YAF2Q8IY57 180 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF276Q8N554 614 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 EDAQ92838 391 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 PIWIL1Q96J94 861 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 ZFRQ96KR1 1074 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 NOX5Q96PH1 765 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 SYT11Q9BT88 431 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 HAUS4Q9H6D7 363 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 CFAP97Q9P2B7 532 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 DUSP12Q9UNI6 340 aa15.89■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF263O14978 683 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 LTFP02788 710 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 UNGP13051 313 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ALADP13716 330 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF75DP51815 510 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 KLHL30Q0D2K2 578 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF77Q15935 545 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 FAM183BPQ6ZVS7 135 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 RSRC2Q7L4I2 434 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF571Q7Z3V5 609 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 PHLDB2Q86SQ0 1253 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 MIB1Q86YT6 1006 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 UBALD2Q8IYN6 164 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 DEPDC1BQ8WUY9 529 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 C18orf8Q96DM3 657 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 ASIC4Q96FT7 647 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 SYNCQ9H7C4 482 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 BRD9Q9H8M2 597 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 KIF9Q9HAQ2 790 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 SEPT11Q9NVA2 429 aaKnown RBP15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 SFMBT1Q9UHJ3 866 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
SMARCD1-211ENST00000551497 GRAP2O75791 330 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 PLEKP08567 350 aaPredicted RBP15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 IRF1P10914 325 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 PRKCIP41743 596 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TNK2Q07912 1038 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 MTF1Q14872 753 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 CLEC16AQ2KHT3 1053 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 HGSNATQ68CP4 663 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TRIM68Q6AZZ1 485 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 KLHDC10Q6PID8 442 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TRIM72Q6ZMU5 477 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 MMS22LQ6ZRQ5 1243 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TTC8Q8TAM2 541 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 RNF139Q8WU17 664 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 SYN2Q92777 582 aaPredicted RBP15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 FAM149B1Q96BN6 582 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 IQCDQ96DY2 449 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 FAM83CQ9BQN1 747 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 SLC2A4RGQ9NR83 387 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 ABCC13Q9NSE7 274 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 THG1LQ9NWX6 298 aaKnown RBP15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 TAS2R14Q9NYV8 317 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 MARCH2Q9P0N8 246 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 WNT6Q9Y6F9 365 aa15.87■□□□□ 0.13
SMARCD1-211ENST00000551497 SLC12A8A0AV02 714 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 ARNTLO00327 626 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 CHADO15335 359 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 HMBSP08397 361 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 NCAM1P13591 858 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 ARSAP15289 507 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 TCF3P15923 654 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 MMP8P22894 467 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 GABRB2P47870 512 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 ADKP55263 362 aaKnown RBP15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 YWHAZP63104 245 aaKnown RBP15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 SLC6A3Q01959 620 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 PTP4A2Q12974 167 aa15.86■□□□□ 0.13
SMARCD1-211ENST00000551497 USP4Q13107 963 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms