RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	PTCH2	Q9Y6C5	1203 aa		12	□□□□□ -0.49
RAB5C-208	ENST00000551338	GREB1	Q4ZG55	1949 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	HHLA1	C9JL84	531 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338		I3L4J1	428 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	RASGRF2	O14827	1237 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	INPPL1	O15357	1258 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	RGS16	O15492	202 aa	Predicted RBP	11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	TOMM70	O94826	608 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	POMC	P01189	267 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ABHD2	P08910	425 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ODC1	P11926	461 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	CYP2F1	P24903	491 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	HOXD10	P28358	340 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	L1CAM	P32004	1257 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	MATK	P42679	507 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	MAGEA4	P43358	317 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	SLCO1A2	P46721	670 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	NDUFV1	P49821	464 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	RABGGTB	P53611	331 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	CACNA2D1	P54289	1103 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	MAP3K7CL	P57077	242 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	DAOA	P59103	153 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	IFI35	P80217	286 aa	Predicted RBP	11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ROR1	Q01973	937 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	TUSC3	Q13454	348 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	LONRF1	Q17RB8	773 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ERMARD	Q5T6L9	678 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ANKRD22	Q5VYY1	191 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	FOXR1	Q6PIV2	292 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	C1orf228	Q6PIY5	440 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	HFE2	Q6ZVN8	426 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	GPRIN1	Q7Z2K8	1008 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	MAP7D3	Q8IWC1	876 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	NAT8L	Q8N9F0	302 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	SLC43A3	Q8NBI5	491 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	RNF169	Q8NCN4	708 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	PXYLP1	Q8TE99	480 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	PGBD4	Q96DM1	585 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	PCED1B	Q96HM7	432 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	SLC2A13	Q96QE2	648 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	NPY6R	Q99463	290 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	MAK16	Q9BXY0	300 aa	Known RBP	11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	ULBP1	Q9BZM6	244 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	PHACTR1	Q9C0D0	580 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	NOD1	Q9Y239	953 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	USP3	Q9Y6I4	520 aa		11.99	□□□□□ -0.49
RAB5C-208	ENST00000551338	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	MOXD2P	A6NHM9	499 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338		H7C0C1	242 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	NRP1	O14786	923 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	TRPA1	O75762	1119 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	TCEA3	O75764	348 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	AP1G2	O75843	785 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	TMEM63A	O94886	807 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	CYP11A1	P05108	521 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	INHA	P05111	366 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	CKB	P12277	381 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	SKI	P12755	728 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	IBSP	P21815	317 aa	Predicted RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	LSP1	P33241	339 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	NOS2	P35228	1153 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	ATP5O	P48047	213 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	CTCF	P49711	727 aa	Predicted RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	TKTL1	P51854	596 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	CDR1	P51861	262 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	NRL	P54845	237 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	HNRNPH2	P55795	449 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	SLC8A3	P57103	927 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	GAD2	Q05329	585 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	MBTPS1	Q14703	1052 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	FASTKD3	Q14CZ7	662 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	SLC25A52	Q3SY17	297 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	PAN2	Q504Q3	1202 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	RAB41	Q5JT25	222 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	DARS2	Q6PI48	645 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	B4GALNT4	Q76KP1	1039 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	PCGF5	Q86SE9	256 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	ZC3H18	Q86VM9	953 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	PPIL6	Q8IXY8	311 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	FAM71D	Q8N9W8	422 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	MYCBPAP	Q8TBZ2	947 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	RAET1E	Q8TD07	263 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	P3H4	Q92791	437 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	NT5C3B	Q969T7	300 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	MYLPF	Q96A32	169 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	FAM149B1	Q96BN6	582 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	RTP4	Q96DX8	246 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	SERPINB12	Q96P63	405 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	PKMYT1	Q99640	499 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	TSEN34	Q9BSV6	310 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	DHX35	Q9H5Z1	703 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	NRDE2	Q9H7Z3	1164 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	EURL	Q9NYK6	297 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	FZD10	Q9ULW2	581 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	INPP5F	Q9Y2H2	1132 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338	MICAL3	Q7RTP6	2002 aa		11.98	□□□□□ -0.49
RAB5C-208	ENST00000551338		A0A1W2PQ45	241 aa	Predicted RBP	11.97	□□□□□ -0.49
RAB5C-208	ENST00000551338		A0A1W2PQY0	241 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms