RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ALDH18A1P54886 795 aaKnown RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 SLURP1P55000 103 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 KCNAB1Q14722 419 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 TMTC4Q5T4D3 741 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 MRNIPQ6NTE8 343 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 TAPT1Q6NXT6 567 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 DRICH1Q6PGQ1 229 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 FOXR2Q6PJQ5 311 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 KIAA0408Q6ZU52 694 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PPP1R32Q7Z5V6 425 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 TTC30AQ86WT1 665 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 RASGRP3Q8IV61 690 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 COLGALT2Q8IYK4 626 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 SPARTQ8N0X7 666 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 MB21D1Q8N884 522 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 OTUD7AQ8TE49 926 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 ZNF384Q8TF68 577 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 GRAMD1AQ96CP6 724 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 OR14A2Q96R54 314 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PNKPQ96T60 521 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 MESP1Q9BRJ9 268 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 PYM1Q9BRP8 204 aaKnown RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 TAF1DQ9H5J8 278 aaPredicted RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 EPS8L2Q9H6S3 715 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 SEC61A2Q9H9S3 476 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 RIC8AQ9NPQ8 531 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 MRPS18AQ9NVS2 196 aaKnown RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 MTO1Q9Y2Z2 717 aaKnown RBP6.07□□□□□ -1.44
CPSF6-206ENST00000550987 LMO7Q8WWI1 1683 aa6.07□□□□□ -1.44
CPSF6-206ENST00000550987 ZNF318Q5VUA4 2279 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 WDFY4Q6ZS81 3184 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 LY75O60449 1722 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 A0A087WZ62 844 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 A0A1B0GVC2 190 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 ACTL6BO94805 426 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 SPATA31D3P0C874 917 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 FCER1AP12319 257 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PECAM1P16284 738 aaPredicted RBP6.06□□□□□ -1.44
CPSF6-206ENST00000550987 DPEP1P16444 411 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 NPPBP16860 134 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 LRPAP1P30533 357 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 AARSP49588 968 aaKnown RBP eCLIP6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PAPOLAP51003 745 aaKnown RBP6.06□□□□□ -1.44
CPSF6-206ENST00000550987 LINC00310P59036 64 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 LILRA4P59901 499 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 HHEXQ03014 270 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 NSUN2Q08J23 767 aaKnown RBP eCLIP6.06□□□□□ -1.44
CPSF6-206ENST00000550987 SURF1Q15526 300 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 FBXO47Q5MNV8 452 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 INTS11Q5TA45 600 aaKnown RBP6.06□□□□□ -1.44
CPSF6-206ENST00000550987 FCRL6Q6DN72 434 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 TANGO2Q6ICL3 276 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 SPATA31D4Q6ZUB0 917 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 SMIM5Q71RC9 77 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 GPRIN1Q7Z2K8 1008 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 KCTD20Q7Z5Y7 419 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PCGF5Q86SE9 256 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 ZNF280BQ86YH2 543 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 C2CD5Q86YS7 1000 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 CNTROBQ8N137 903 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PSD4Q8NDX1 1056 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 BPIFB1Q8TDL5 484 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 AFG1LQ8WV93 481 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 UBE2Q2Q8WVN8 375 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PLA2G12BQ9BX93 195 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 SLC26A6Q9BXS9 759 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 BRD8Q9H0E9 1235 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 PLA2G3Q9NZ20 509 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 DKK4Q9UBT3 224 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 HPSEQ9Y251 543 aa6.06□□□□□ -1.44
CPSF6-206ENST00000550987 CCDC195A0A1B0GUA6 201 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 DNPH1O43598 174 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
CPSF6-206ENST00000550987 ERN1O75460 977 aaKnown RBP6.05□□□□□ -1.44
CPSF6-206ENST00000550987 GLP2RO95838 553 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 POLBP06746 335 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 GYS1P13807 737 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 ITGALP20701 1170 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 GCLCP48506 637 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-206ENST00000550987 BCAT1P54687 386 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 AP2B1P63010 937 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 FOXD4Q12950 439 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-206ENST00000550987 KCNA10Q16322 511 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 SLC5A9Q2M3M2 681 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 NT5DC1Q5TFE4 455 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 TCERG1LQ5VWI1 586 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.05□□□□□ -1.44
CPSF6-206ENST00000550987 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 STT3BQ8TCJ2 826 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 MPHOSPH9Q99550 1183 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 SLC25A32Q9H2D1 315 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 MLXIPQ9HAP2 919 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 HELLSQ9NRZ9 838 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 SMC4Q9NTJ3 1288 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 SRP68Q9UHB9 627 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms