RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 KDM7AQ6ZMT4 941 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 LGI2Q8N0V4 545 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SNF8Q96H20 258 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 ACO2Q99798 780 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 HAUS8Q9BT25 410 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 CDH9Q9ULB4 789 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SLC27A5Q9Y2P5 690 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SMIM24O75264 130 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 ARF4P18085 180 aaPredicted RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 OR1E1P30953 314 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 IFNA8P32881 189 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 HIF1AQ16665 826 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 TFB1MQ8WVM0 346 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 ISCUQ9H1K1 167 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 AP4E1Q9UPM8 1137 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SIK3Q9Y2K2 1263 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 N4BP2Q86UW6 1770 aaPredicted RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 NCAM2O15394 837 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 B4GALT5O43286 388 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 RFC1P35251 1148 aaPredicted RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 RIPOR3Q96MK2 946 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 NUDT5Q9UKK9 219 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 NFICP08651 508 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 CHKAP35790 457 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 AARSP49588 968 aaKnown RBP eCLIP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 SCNN1BP51168 640 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 GEMP55040 296 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 ANO5Q75V66 913 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 GET4Q7L5D6 327 aaPredicted RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 TFAP2DQ7Z6R9 452 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 RPAINQ86UA6 219 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 OSGEPL1Q9H4B0 414 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
NR4A1-215ENST00000550557 DNAJC18Q9H819 358 aa12.62□□□□□ -0.39
NR4A1-215ENST00000550557 GTPBP10A4D1E9 387 aaKnown RBP12.61□□□□□ -0.39
NR4A1-215ENST00000550557 CHRM3P20309 590 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 CDC25CP30307 473 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 GRM5P41594 1212 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 SLC12A3P55017 1021 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 MIIPQ5JXC2 388 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 EEF1DP3Q658K8 133 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ATG16L1Q676U5 607 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 PHACTR4Q8IZ21 702 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 EMC1Q8N766 993 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ALG6Q9Y672 507 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 CCDC130P13994 396 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 BRCC3P46736 316 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ACTN3Q08043 901 aaPredicted RBP12.61□□□□□ -0.39
NR4A1-215ENST00000550557 BYSLQ13895 437 aaKnown RBP12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ZNF606Q8WXB4 792 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 TTC17Q96AE7 1141 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 GMLQ99445 158 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 GPATCH2LQ9NWQ4 482 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 LTFP02788 710 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 USP17L7P0C7H9 530 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 GABRR2P28476 465 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 AGBL2Q5U5Z8 902 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 LINC00523Q86TU6 105 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ULBP1Q9BZM6 244 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
NR4A1-215ENST00000550557 ATRNL1Q5VV63 1379 aa12.61□□□□□ -0.39
NR4A1-215ENST00000550557 GSTA4O15217 222 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 ZW10O43264 779 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 PAEPP09466 180 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 ICAM3P32942 547 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 UGCGQ16739 394 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 FOXR2Q6PJQ5 311 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 SERPINA13PQ6UXR4 307 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 LRRC55Q6ZSA7 311 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 TSPAN17Q96FV3 270 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 AKAP7Q9P0M2 348 aaPredicted RBP12.6□□□□□ -0.39
NR4A1-215ENST00000550557 SENP1Q9P0U3 644 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
NR4A1-215ENST00000550557 PHEXP78562 749 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 ZNF200P98182 395 aaPredicted RBP12.6□□□□□ -0.39
NR4A1-215ENST00000550557 PDK2Q15119 407 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
NR4A1-215ENST00000550557 ZDHHC17Q8IUH5 632 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 TPCN2Q8NHX9 752 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
NR4A1-215ENST00000550557 OMDQ99983 421 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms