RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CCDC172P0C7W6 258 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 CDH5P33151 784 aaPredicted RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 SNX16P57768 344 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 CDR2Q01850 454 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 SLC44A4Q53GD3 710 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 FIGNQ5HY92 759 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 RSRC2Q7L4I2 434 aaKnown RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 SIX5Q8N196 739 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 C1orf131Q8NDD1 294 aaKnown RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 BAP1Q92560 729 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 ZFYVE19Q96K21 471 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 PPP1R13BQ96KQ4 1090 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 ZFRQ96KR1 1074 aaKnown RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 KLF16Q9BXK1 252 aaPredicted RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 XPO4Q9C0E2 1151 aaKnown RBP20.3■□□□□ 0.84
DDX54-207ENST00000550016 ABCC13Q9NSE7 274 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 CFAP97Q9P2B7 532 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 NUDT5Q9UKK9 219 aa20.3■□□□□ 0.84
DDX54-207ENST00000550016 KRBA1A5PL33 1030 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 E5RJQ4 531 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 ARNTLO00327 626 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 SART1O43290 800 aaKnown RBP20.29■□□□□ 0.84
DDX54-207ENST00000550016 LSM8O95777 96 aaKnown RBP20.29■□□□□ 0.84
DDX54-207ENST00000550016 FERP16591 822 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 ARID5AQ03989 594 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 PDGFRLQ15198 375 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 BMP8AQ7Z5Y6 402 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 CSGALNACT1Q8TDX6 532 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 CLEC4CQ8WTT0 213 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 SLC20A1Q8WUM9 679 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 GOLGA1Q92805 767 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 CPXM1Q96SM3 734 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 FAM83CQ9BQN1 747 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 TTYH3Q9C0H2 523 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 C11orf16Q9NQ32 467 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 OLA1Q9NTK5 396 aaKnown RBP20.29■□□□□ 0.84
DDX54-207ENST00000550016 DUS2Q9NX74 493 aaKnown RBP20.29■□□□□ 0.84
DDX54-207ENST00000550016 MIA3Q5JRA6 1907 aa20.29■□□□□ 0.84
DDX54-207ENST00000550016 E2F8A0AVK6 867 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 FAM86C2PA6NEL3 165 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 PAPSS1O43252 624 aaPredicted RBP20.28■□□□□ 0.84
DDX54-207ENST00000550016 LTFP02788 710 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 CHRNB2P17787 502 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 MLF2Q15773 248 aaPredicted RBP20.28■□□□□ 0.84
DDX54-207ENST00000550016 TMEM31Q5JXX7 168 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 IER5LQ5T953 404 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 HFE2Q6ZVN8 426 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 IRF2BP2Q7Z5L9 587 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 RNF139Q8WU17 664 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 OSCP1Q8WVF1 389 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 PBXIP1Q96AQ6 731 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 IQCDQ96DY2 449 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 SHDQ96IW2 340 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 ARHGEF3Q9NR81 526 aa20.28■□□□□ 0.84
DDX54-207ENST00000550016 F5P12259 2224 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 SLC9A3R1O14745 358 aaPredicted RBP20.27■□□□□ 0.84
DDX54-207ENST00000550016 MDM4O15151 490 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 GLULP15104 373 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 IFNAR2P48551 515 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 FMO1Q01740 532 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 PRKCQQ04759 706 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 GOLGA8FQ08AF8 430 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 GOLGA8DPQ0D2H9 430 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 EFEMP1Q12805 493 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 TRIM72Q6ZMU5 477 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 EDEM1Q92611 657 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 SYNCQ9H7C4 482 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 HEBP1Q9NRV9 189 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 MARCH2Q9P0N8 246 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 TJP2Q9UDY2 1190 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 STRIP2Q9ULQ0 834 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 SH3BP1Q9Y3L3 701 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 WNT6Q9Y6F9 365 aa20.27■□□□□ 0.84
DDX54-207ENST00000550016 A0A1W2PQJ5 194 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 LRRC53A6NM62 1247 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 PRR33A8MZF0 331 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 MLLT6P55198 1093 aaPredicted RBP20.26■□□□□ 0.83
DDX54-207ENST00000550016 STARD6P59095 220 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 NOMO3P69849 1222 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 COG7P83436 770 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 TNK2Q07912 1038 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 RUNX3Q13761 415 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 ITPRIPL2Q3MIP1 535 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 PTPN20Q4JDL3 420 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 SFMBT2Q5VUG0 894 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 TRIM68Q6AZZ1 485 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 ERICH1Q86X53 443 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 MIB1Q86YT6 1006 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 IPO4Q8TEX9 1081 aaKnown RBP20.26■□□□□ 0.83
DDX54-207ENST00000550016 ATP2A3Q93084 1043 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 TRIM62Q9BVG3 475 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 LINC00597Q9H2U6 94 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 MFSD1Q9H3U5 465 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 EBF3Q9H4W6 596 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 HPS4Q9NQG7 708 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 GTSE1Q9NYZ3 720 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 AIPL1Q9NZN9 384 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 TBC1D14Q9P2M4 693 aa20.26■□□□□ 0.83
DDX54-207ENST00000550016 RASAL2Q9UJF2 1139 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms