RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 COBLL1Q53SF7 1204 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TOGARAM2Q6ZUX3 1019 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 IL17RCQ8NAC3 791 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 RLN3Q8WXF3 142 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 SLC35C1Q96A29 364 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 PNKPQ96T60 521 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 DUSP15Q9H1R2 295 aaPredicted RBP16.78■□□□□ 0.28
COX6A1-203ENST00000550009 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 TLR8Q9NR97 1041 aaKnown RBP16.78■□□□□ 0.28
COX6A1-203ENST00000550009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
COX6A1-203ENST00000550009 COMMD8Q9NX08 183 aa16.78■□□□□ 0.28
COX6A1-203ENST00000550009 NCOR2Q9Y618 2525 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
COX6A1-203ENST00000550009 PPP1R3GB7ZBB8 358 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 TULP3O75386 442 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 KLKB1P03952 638 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 HMBSP08397 361 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 CNR2P34972 360 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 WASP42768 502 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 ENPEPQ07075 957 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 PUM1Q14671 1186 aaKnown RBP eCLIP16.77■□□□□ 0.28
COX6A1-203ENST00000550009 ANO4Q32M45 955 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 PLK5Q496M5 336 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 ANO7Q6IWH7 933 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 PRR23CQ6ZRP0 262 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 TPGS1Q6ZTW0 290 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 BHLHA9Q7RTU4 235 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 UBR7Q8N806 425 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 MDGA1Q8NFP4 955 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 SECISBP2LQ93073 1101 aaKnown RBP16.77■□□□□ 0.28
COX6A1-203ENST00000550009 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 NACA2Q9H009 215 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 FBXO44Q9H4M3 255 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 CYLDQ9NQC7 956 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 SPHK2Q9NRA0 654 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 RMND1Q9NWS8 449 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 MMP17Q9ULZ9 603 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 USP3Q9Y6I4 520 aa16.77■□□□□ 0.28
COX6A1-203ENST00000550009 CNOT1A5YKK6 2376 aaKnown RBP16.76■□□□□ 0.27
COX6A1-203ENST00000550009 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
COX6A1-203ENST00000550009 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
COX6A1-203ENST00000550009 GABBR2O75899 941 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 APBB3O95704 486 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 STX17P56962 302 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 FKBP3Q00688 224 aaKnown RBP16.76■□□□□ 0.27
COX6A1-203ENST00000550009 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 C10orf120Q5SQS8 335 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 TTI2Q6NXR4 508 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 PIGZQ86VD9 579 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
COX6A1-203ENST00000550009 UBA3Q8TBC4 463 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 TFAP2BQ92481 460 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 ACOX2Q99424 681 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 TBC1D14Q9P2M4 693 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 SPEGQ15772 3267 aa16.76■□□□□ 0.27
COX6A1-203ENST00000550009 NEDD8-MDP1E9PL57 170 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 PIK3R2O00459 728 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
COX6A1-203ENST00000550009 STC2O76061 302 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 ADH1CP00326 375 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 APODP05090 189 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 ATP5C1P36542 298 aaKnown RBP16.75■□□□□ 0.27
COX6A1-203ENST00000550009 GAD2Q05329 585 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 CUL2Q13617 745 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 CRY1Q16526 586 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 Q6ZNB5 142 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 ERMP1Q7Z2K6 904 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 CACNA2D4Q7Z3S7 1137 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 CAMKK1Q8N5S9 505 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 TSTD1Q8NFU3 115 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 TSG101Q99816 390 aa16.75■□□□□ 0.27
COX6A1-203ENST00000550009 A0A0A0MRY4 1105 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 PRRT4C9JH25 899 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 HOXC11O43248 304 aaPredicted RBP16.74■□□□□ 0.27
COX6A1-203ENST00000550009 EPN2O95208 641 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 SMC2O95347 1197 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 FMO5P49326 533 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 LMNB2Q03252 620 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 PDE4CQ08493 712 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 EFEMP1Q12805 493 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 CSRP2Q16527 193 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 ARHGAP17Q68EM7 881 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 CCDC186Q7Z3E2 898 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 RASSF3Q86WH2 238 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 ARHGEF19Q8IW93 802 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 CCDC150Q8NCX0 1101 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 LMO3Q8TAP4 145 aa16.74■□□□□ 0.27
COX6A1-203ENST00000550009 NELFBQ8WX92 580 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms