RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RGS7P49802 495 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 STARD6P59095 220 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 PRKCQQ04759 706 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 PDGFRLQ15198 375 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 PTPN20Q4JDL3 420 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 ZDHHC17Q8IUH5 632 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 TMEM35BQ8NCS4 154 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 C1orf131Q8NDD1 294 aaKnown RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 SH3RF2Q8TEC5 729 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 OSCP1Q8WVF1 389 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 NOX5Q96PH1 765 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 XPO4Q9C0E2 1151 aaKnown RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 TRPC7Q9HCX4 862 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
PFDN5-208ENST00000549995 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
PFDN5-208ENST00000549995 KRBA1A5PL33 1030 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 TMEM221A6NGB7 291 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 LRRC53A6NM62 1247 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 PRR33A8MZF0 331 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 M0R296 226 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 DPYSL4O14531 572 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 ZNF263O14978 683 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CBFA2T2O43439 604 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 IGLV3-25P01717 112 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 LTFP02788 710 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 FYNP06241 537 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CCDC172P0C7W6 258 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 RALAP11233 206 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 GDI1P31150 447 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 ATP5C1P36542 298 aaKnown RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CENPCQ03188 943 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 NNTQ13423 1086 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 GRM2Q14416 872 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 EML3Q32P44 896 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 E4F1Q66K89 784 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 OLFML1Q6UWY5 402 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 Q6ZNB5 142 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 SLC26A9Q7LBE3 791 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CACNA2D4Q7Z3S7 1137 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 SLC20A1Q8WUM9 679 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 TRIM62Q9BVG3 475 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
PFDN5-208ENST00000549995 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 HPS4Q9NQG7 708 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 ARHGEF3Q9NR81 526 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 CAPN11Q9UMQ6 739 aa12.48□□□□□ -0.41
PFDN5-208ENST00000549995 TBX18O95935 607 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 IGLV3-27P01718 113 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 GYPCP04921 128 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 TPM3P06753 285 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 MMEP08473 750 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 MBL2P11226 248 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 LCP1P13796 627 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 SNX16P57768 344 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 IER5LQ5T953 404 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 CWF19L1Q69YN2 538 aaKnown RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 HFE2Q6ZVN8 426 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 ARCQ7LC44 396 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 VSTM4Q8IW00 320 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 FAM217AQ8IXS0 508 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 CHFRQ96EP1 664 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 PIWIL1Q96J94 861 aaKnown RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 SLC2A13Q96QE2 648 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 THG1LQ9NWX6 298 aaKnown RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 TJP2Q9UDY2 1190 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 HBS1LQ9Y450 684 aaKnown RBP12.47□□□□□ -0.41
PFDN5-208ENST00000549995 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
PFDN5-208ENST00000549995 SLC9A3R1O14745 358 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-208ENST00000549995 AP5Z1O43299 807 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 LATS1O95835 1130 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 ABL1P00519 1130 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 ERBB2P04626 1255 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 MMP8P22894 467 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 COG7P83436 770 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 ZBED6P86452 979 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 RING1Q06587 406 aa12.46□□□□□ -0.41
PFDN5-208ENST00000549995 PTP4A2Q12974 167 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms