RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 RALAP11233 206 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 TCP1P17987 556 aaKnown RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 CTNNA1P35221 906 aaKnown RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 USP46P62068 366 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 TAF10Q12962 218 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 PPM1LQ5SGD2 360 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 CC2D1AQ6P1N0 951 aaPredicted RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 POLNQ7Z5Q5 900 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 RHOT1Q8IXI2 618 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 ZNF276Q8N554 614 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 GDPD5Q8WTR4 605 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 NDRG1Q92597 394 aaKnown RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 CENPIQ92674 756 aaPredicted RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 CD101Q93033 1021 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 PGAP3Q96FM1 320 aaPredicted RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 NPY6RQ99463 290 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 TLR10Q9BXR5 811 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 OLA1Q9NTK5 396 aaKnown RBP18.18■□□□□ 0.5
LETMD1-220ENST00000549686 HYOU1Q9Y4L1 999 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 GBF1Q92538 1859 aa18.18■□□□□ 0.5
LETMD1-220ENST00000549686 A0A1W2PQH9 124 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 ZMYND10O75800 440 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 F9P00740 461 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 ATP1A1P05023 1023 aaKnown RBP18.17■□□□□ 0.5
LETMD1-220ENST00000549686 FYNP06241 537 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 KRT7P08729 469 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 NCAM1P13591 858 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 HMGA1P17096 107 aaKnown RBP18.17■□□□□ 0.5
LETMD1-220ENST00000549686 DUSP6Q16828 381 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 PABPC1LQ4VXU2 614 aaKnown RBP18.17■□□□□ 0.5
LETMD1-220ENST00000549686 SNX30Q5VWJ9 437 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 TRNP1Q6NT89 227 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 DNAJB7Q7Z6W7 309 aaPredicted RBP18.17■□□□□ 0.5
LETMD1-220ENST00000549686 SCD5Q86SK9 330 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 GPR152Q8TDT2 470 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 RNF139Q8WU17 664 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 ZNF512Q96ME7 567 aaPredicted RBP18.17■□□□□ 0.5
LETMD1-220ENST00000549686 CFAP57Q96MR6 1250 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 TLE6Q9H808 572 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 ZDHHC7Q9NXF8 308 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 LMCD1Q9NZU5 365 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 GMIPQ9P107 970 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 SNX12Q9UMY4 172 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 USTQ9Y2C2 406 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
LETMD1-220ENST00000549686 CES2O00748 559 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 ENC1O14682 589 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 LRCH4O75427 683 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 ENDOD1O94919 500 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 CSPG5O95196 566 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 FGF19O95750 216 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 SPATA31D3P0C874 917 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 GBP1P32455 592 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 RDXP35241 583 aaKnown RBP18.16■□□□□ 0.5
LETMD1-220ENST00000549686 SULT1E1P49888 294 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 TUBP50607 506 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 MTMR3Q13615 1198 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 MSANTD2Q6P1R3 559 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 SPATA31D4Q6ZUB0 917 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 BNIPLQ7Z465 357 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 LEMD2Q8NC56 503 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 STKLD1Q8NE28 680 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 FAM172AQ8WUF8 416 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 TBCBQ99426 244 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 ZNF576Q9H609 170 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 MAN1C1Q9NR34 630 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 TRPM5Q9NZQ8 1165 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 MAGED2Q9UNF1 606 aaPredicted RBP18.16■□□□□ 0.5
LETMD1-220ENST00000549686 NAALADL1Q9UQQ1 740 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 SAR1BQ9Y6B6 198 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 MYH10P35580 1976 aa18.16■□□□□ 0.5
LETMD1-220ENST00000549686 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 EPOPA6NHQ4 379 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 FANCGO15287 622 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 PRPSAP2O60256 369 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 XYLBO75191 536 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 SSR1P43307 286 aaKnown RBP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 AIF1P55008 147 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 RWDD2BP57060 319 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 ATP11AP98196 1134 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 C15orf59Q2T9L4 293 aaPredicted RBP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 BOLA3Q53S33 107 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 RSRC2Q7L4I2 434 aaKnown RBP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 PBKQ96KB5 322 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 CARD9Q9H257 536 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 FAM204AQ9H8W3 233 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 NMUR1Q9HB89 426 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 DZANK1Q9NVP4 752 aa18.15■□□□□ 0.5
LETMD1-220ENST00000549686 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 DDX56Q9NY93 547 aaKnown RBP18.15■□□□□ 0.5
LETMD1-220ENST00000549686 M0QYT0 321 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 DDX3YO15523 660 aaKnown RBP18.14■□□□□ 0.49
LETMD1-220ENST00000549686 NCK2O43639 380 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 SRGAP2BP0DMP2 458 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 RARGP13631 454 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms