RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CLCNKBP51801 687 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 HK2P52789 917 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 NDST2P52849 883 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 BST2Q10589 180 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 SEPT6Q14141 434 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 BRD3Q15059 726 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ZYXQ15942 572 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 C2orf27AQ580R0 203 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 THNSL2Q86YJ6 484 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CREG2Q8IUH2 290 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 UMODL1-AS1Q8N2C9 162 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 SEPT8Q92599 483 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 RABGGTAQ92696 567 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CCDC74AQ96AQ1 378 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM176AQ96HP8 235 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 SHDQ96IW2 340 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CDK5RAP3Q96JB5 506 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 NT5C1BQ96P26 610 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 ACAP3Q96P50 834 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 UBE2OQ9C0C9 1292 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 CHRNA10Q9GZZ6 450 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 MRPL44Q9H9J2 332 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 DONSONQ9NYP3 566 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 COPG2Q9UBF2 871 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 AFF4Q9UHB7 1163 aaKnown RBP5.15□□□□□ -1.59
SCAF11-212ENST00000549162 DPP7Q9UHL4 492 aa5.15□□□□□ -1.59
SCAF11-212ENST00000549162 K7ENM7 598 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 K7ERI5 159 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ARNTLO00327 626 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PDPK1O15530 556 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 HOXC11O43248 304 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CSDE1O75534 798 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 GCATO75600 419 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ASMTLO95671 621 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 BPNT1O95861 308 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TAL1P17542 331 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 IVDP26440 423 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 EIF4A3P38919 411 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CLCN6P51797 869 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 EPHB1P54762 984 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NLRP11P59045 1033 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF33BQ06732 778 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 IFRD2Q12894 506 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 KIAA0753Q2KHM9 967 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TCTN1Q2MV58 587 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 P3H1Q32P28 736 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 KBTBD12Q3ZCT8 623 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 SH3PXD2AQ5TCZ1 1133 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PPP4R4Q6NUP7 873 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 BBS12Q6ZW61 710 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 HTR3DQ70Z44 454 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CPLX3Q8WVH0 158 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 WNT8BQ93098 351 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 SCARF2Q96GP6 870 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF764Q96H86 408 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ZFRQ96KR1 1074 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 BAG1Q99933 345 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 VN1R3Q9BXE9 311 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NHEJ1Q9H9Q4 299 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 UBP1Q9NZI7 540 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 IGSF9Q9P2J2 1179 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 IP6K2Q9UHH9 426 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PPP2R2CQ9Y2T4 447 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NOC2LQ9Y3T9 749 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CDY2AQ9Y6F7 541 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 EPN1Q9Y6I3 576 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PCM1Q15154 2024 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 C5orf60A6NFR6 353 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 RNF225M0QZC1 329 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TNPO2O14787 897 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 DCLK1O15075 740 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 HLA-DRAP01903 254 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 L1CAMP32004 1257 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 MXI1P50539 228 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 FOXK2Q01167 660 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM132DQ14C87 1099 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CCNG2Q16589 344 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 SOWAHAQ2M3V2 549 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 XKR9Q5GH70 373 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 FAM47CQ5HY64 1035 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 FBXL19Q6PCT2 694 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PDCL2Q8N4E4 241 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 COLGALT1Q8NBJ5 622 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 GPR152Q8TDT2 470 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM40Q8WWA1 233 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NAP1L3Q99457 506 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ACE2Q9BYF1 805 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ETNK1Q9HBU6 452 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 HDAC6Q9UBN7 1215 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF180Q9UJW8 692 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 MAPK8IP1Q9UQF2 711 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TBC1D30Q9Y2I9 924 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 H3BNC9 293 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 MTSS1O43312 755 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 MGEA5O60502 916 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TADA3O75528 432 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 ARHGEF15O94989 841 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PEX11BO96011 259 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CCDC175P0C221 793 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 C6orf222P0C671 652 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms