RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MTMR12Q9C0I1 747 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 HACL1Q9UJ83 578 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 SOX13Q9UN79 622 aa14.26□□□□□ -0.13
HDAC7-228ENST00000548938 ARHGAP42A6NI28 874 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 H0YCG3 227 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SNNO75324 88 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SPAG6O75602 509 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SPATA31D3P0C874 917 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 YY1P25490 414 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 CCNFP41002 786 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 GRIA2P42262 883 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 HNRNPDQ14103 355 aaKnown RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 EFHC1Q5JVL4 640 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SPATA31D4Q6ZUB0 917 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 POU5F2Q8N7G0 328 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 TRIM56Q9BRZ2 755 aaKnown RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 RAB6BQ9NRW1 208 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 TBC1D30Q9Y2I9 924 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 OPHN1O60890 802 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 FKBP6O75344 327 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 PYGLP06737 847 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SERPINA6P08185 405 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 CSH1P0DML2 217 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 CSH2P0DML3 217 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 EIF4BP23588 611 aaKnown RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 CDH5P33151 784 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 HIRAP54198 1017 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 MSLNQ13421 630 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 HIC1Q14526 733 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 RALGPS1Q5JS13 557 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 ZNF518BQ9C0D4 1074 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 POPDC2Q9HBU9 364 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 VCX3AQ9NNX9 186 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 PNPLA8Q9NP80 782 aa14.25□□□□□ -0.13
HDAC7-228ENST00000548938 ZC3H7BQ9UGR2 993 aaKnown RBP14.25□□□□□ -0.13
HDAC7-228ENST00000548938 SDR42E2A6NKP2 422 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 MIPP30301 263 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 TNFSF9P41273 254 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 AQP4P55087 323 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 PSMC1P62191 440 aaKnown RBP14.24□□□□□ -0.13
HDAC7-228ENST00000548938 IRX4P78413 519 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ASPHQ12797 758 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 TBCCQ15814 346 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 DEPTORQ8TB45 409 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 C1orf21Q9H246 121 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 IRAK4Q9NWZ3 460 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 IL1RAPL1Q9NZN1 696 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ADAMTS6Q9UKP5 1117 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 K7ERI5 159 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 PDE5AO76074 875 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 BPGMP07738 259 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 KCNA2P16389 499 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 AOC1P19801 751 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 PEX2P28328 305 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 EPHB1P54762 984 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ARMC3Q5W041 872 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 NDUFAF2Q8N183 169 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 SLC26A7Q8TE54 656 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 USP6NLQ92738 828 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
HDAC7-228ENST00000548938 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ZDHHC7Q9NXF8 308 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ZNF180Q9UJW8 692 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 PCDHGC3Q9UN70 934 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 ADGRA2Q96PE1 1338 aa14.24□□□□□ -0.13
HDAC7-228ENST00000548938 DOCK5Q9H7D0 1870 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 A6NJR5 290 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 CHADO15335 359 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 PIGRP01833 764 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 PSAPP07602 524 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 NOMO1Q15155 1222 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 TBC1D25Q3MII6 688 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 ADGRG6Q86SQ4 1221 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 MMP19Q99542 508 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 APOL6Q9BWW8 343 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 H7C0C1 242 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 LDHAP00338 332 aaKnown RBP14.23□□□□□ -0.13
HDAC7-228ENST00000548938 CD19P15391 556 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 ATP5OP48047 213 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 WASHC5Q12768 1159 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 DLG1Q12959 904 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 STX3Q13277 289 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 LSAMPQ13449 338 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 MED21Q13503 144 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 CCNIQ14094 377 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 MROH9Q5TGP6 573 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 AAGABQ6PD74 315 aa14.23□□□□□ -0.13
HDAC7-228ENST00000548938 CMASQ8NFW8 434 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms