RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RPF1Q9H9Y2 349 aaKnown RBP21.08■□□□□ 0.96
CTDSP2-204ENST00000548823 C2orf42Q9NWW7 574 aa21.08■□□□□ 0.96
CTDSP2-204ENST00000548823 LHX6Q9UPM6 363 aa21.08■□□□□ 0.96
CTDSP2-204ENST00000548823 PHACTR2O75167 634 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 RPP40O75818 363 aaKnown RBP21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 USP8P40818 1118 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 CCR2P41597 374 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 SGSM1Q2NKQ1 1148 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 CYP4A22Q5TCH4 519 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 APBB1IPQ7Z5R6 666 aaPredicted RBP21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 KBTBD6Q86V97 674 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 LRRC57Q8N9N7 239 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 TPCN2Q8NHX9 752 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 TAF4BQ92750 862 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 OSBPL9Q96SU4 736 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 ASB7Q9H672 318 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 VPS45Q9NRW7 570 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 V9GYY5 206 aaPredicted RBP21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 LAMA1P25391 3075 aa21.07■□□□□ 0.96
CTDSP2-204ENST00000548823 CCDC163A0A0D9SF12 145 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 TMEM189-UBE2V1I3L0A0 370 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 PRRG1O14668 218 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 ABLIM3O94929 683 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 TUBBP07437 444 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 ACO1P21399 889 aaKnown RBP21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 NOP14P78316 857 aaKnown RBP21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 FMO1Q01740 532 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 ZNF252P-AS1Q0IIN9 211 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 SEZ6Q53EL9 994 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 NT5DC4Q86YG4 428 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 UBR7Q8N806 425 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 GATA6Q92908 595 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 E2F7Q96AV8 911 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 ANKRD36BP1Q96IX9 119 aa21.06■□□□□ 0.96
CTDSP2-204ENST00000548823 GIPC1O14908 333 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 MTA2O94776 668 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 TNNC2P02585 160 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 H2AFXP16104 143 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 SPINK2P20155 84 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 HOXC13P31276 330 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 MPLP40238 635 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 KPNA1P52294 538 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 ROR1Q01973 937 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 SLC8B1Q6J4K2 584 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 PPP1R2P3Q6NXS1 205 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 SLC47A2Q86VL8 602 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 CREG2Q8IUH2 290 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 SYNPOQ8N3V7 929 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 ZSCAN18Q8TBC5 510 aaPredicted RBP21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 DDX27Q96GQ7 796 aaKnown RBP21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 SMOC1Q9H4F8 434 aa21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 APOBEC3GQ9HC16 384 aaKnown RBP21.05■□□□□ 0.96
CTDSP2-204ENST00000548823 MYBPHLA2RUH7 354 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 HEPACAM2A8MVW5 462 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 CHADO15335 359 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 B3GAT3O94766 335 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 TMEM191BP0C7N4 346 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 ATF2P15336 505 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 TKTP29401 623 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 NOP2P46087 812 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 DCAF4L1Q3SXM0 396 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 TEX35Q5T0J7 233 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 RALGPS2Q86X27 583 aaPredicted RBP21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 CD302Q8IX05 232 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 TCEAL8Q8IYN2 117 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 MSANTD4Q8NCY6 345 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 ZC3H10Q96K80 434 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 PCDHB18PQ96TA0 734 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 ADPGKQ9BRR6 497 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 SEPT11Q9NVA2 429 aaKnown RBP21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 NUB1Q9Y5A7 615 aa21.04■□□□□ 0.96
CTDSP2-204ENST00000548823 SLC38A8A6NNN8 435 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 TRAPPC3O43617 180 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 MOSPD3O75425 235 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 FTLP02792 175 aaPredicted RBP21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 KRT5P13647 590 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 SOX9P48436 509 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 TXNDC11Q6PKC3 985 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 TRIM72Q6ZMU5 477 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 YAF2Q8IY57 180 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 EFCAB13Q8IY85 973 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 ELMOD1Q8N336 334 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 PDCL2Q8N4E4 241 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 SLC35G2Q8TBE7 412 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 MTMR12Q9C0I1 747 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 CXCL16Q9H2A7 254 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 ABCB6Q9NP58 842 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 SNTG2Q9NY99 539 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 TAS2R14Q9NYV8 317 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 WDFY3Q8IZQ1 3526 aa21.03■□□□□ 0.96
CTDSP2-204ENST00000548823 SPECC1L-ADORA2AF8WAN1 911 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 SRGAP2O75044 1071 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 RECQL4O94761 1208 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 CST3P01034 146 aaPredicted RBP21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 MMEP08473 750 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 CTHP32929 405 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 GRM5P41594 1212 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 TRPC3Q13507 836 aa21.02■□□□□ 0.96
CTDSP2-204ENST00000548823 CCINQ13939 588 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms