RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 MON1AQ86VX9 555 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 ZCCHC9Q8N567 271 aaKnown RBP14.95□□□□□ -0.02
PTCH1-217ENST00000548420 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 TTC16Q8NEE8 873 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 ZSWIM2Q8NEG5 633 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 GCNAQ96QF7 691 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 CYP2S1Q96SQ9 504 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 GOLPH3LQ9H4A5 285 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 HCN2Q9UL51 889 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 C2CD2Q9Y426 696 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 ANK1P16157 1881 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 BSNQ9UPA5 3926 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 A0A1B0GTW7 788 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 KIAA0391O15091 583 aaKnown RBP14.94□□□□□ -0.02
PTCH1-217ENST00000548420 TGFB1I1O43294 461 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 XPOTO43592 962 aaKnown RBP14.94□□□□□ -0.02
PTCH1-217ENST00000548420 LDHAP00338 332 aaKnown RBP14.94□□□□□ -0.02
PTCH1-217ENST00000548420 GNSP15586 552 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 AARSP49588 968 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTCH1-217ENST00000548420 BMT2Q1RMZ1 405 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 JADE1Q6IE81 842 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 C12orf40Q86WS4 652 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 SYCP3Q8IZU3 236 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 DNASE2BQ8WZ79 361 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 CD248Q9HCU0 757 aa14.94□□□□□ -0.02
PTCH1-217ENST00000548420 UBE4BO95155 1302 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 CACNA1DQ01668 2161 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 A0A0A0MRY4 1105 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 PIRO00625 290 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 TADA3O75528 432 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 ZNF202O95125 648 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 IL18RAPO95256 599 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 CER1O95813 267 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 TMPRSS3P57727 454 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 SNRPFP62306 86 aaKnown RBP14.93□□□□□ -0.02
PTCH1-217ENST00000548420 FAM160A1Q05DH4 1040 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 TBC1D25Q3MII6 688 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 HSF5Q4G112 596 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-217ENST00000548420 KIAA1614Q5VZ46 1190 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 NT5DC4Q86YG4 428 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 EXD3Q8N9H8 876 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 FSIP1Q8NA03 581 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 SNRNP27Q8WVK2 155 aaKnown RBP14.93□□□□□ -0.02
PTCH1-217ENST00000548420 ERLEC1Q96DZ1 483 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 SEPT5Q99719 369 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-217ENST00000548420 ZMYM5Q9UJ78 669 aa14.93□□□□□ -0.02
PTCH1-217ENST00000548420 TLN1Q9Y490 2541 aaKnown RBP14.92□□□□□ -0.02
PTCH1-217ENST00000548420 OR6C75A6NL08 312 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 KAT7O95251 611 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 NFICP08651 508 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 POU3F2P20265 443 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-217ENST00000548420 PAX3P23760 479 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 DDX6P26196 483 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTCH1-217ENST00000548420 WNT7BP56706 349 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 ZXDBP98169 803 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 STK4Q13043 487 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 NR1H3Q13133 447 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 SERINC3Q13530 473 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 KMT5BQ4FZB7 885 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 KRBA2Q6ZNG9 492 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 ENGASEQ8NFI3 743 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 TMEM174Q8WUU8 243 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 FAM212AQ96EL1 285 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 SAAL1Q96ER3 474 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 LGMNQ99538 433 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 FAM213AQ9BRX8 229 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 SLC6A17Q9H1V8 727 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 HSFX1Q9UBD0 423 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 SLCO1B1Q9Y6L6 691 aa14.92□□□□□ -0.02
PTCH1-217ENST00000548420 ICE1Q9Y2F5 2266 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 A0A1W2PQF6 199 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 CLEC18AA5D8T8 446 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 CBX4O00257 560 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 NDUFV2P19404 249 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 ACTN2P35609 894 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 GUCY2FP51841 1108 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 LILRA4P59901 499 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 DPYDQ12882 1025 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 MYBPC2Q14324 1141 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 MGAT5BQ3V5L5 792 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 WDR45BQ5MNZ6 344 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 SYCP2LQ5T4T6 812 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 C9orf57Q5W0N0 161 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 ARMCX5Q6P1M9 558 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 CLEC18BQ6UXF7 455 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 MIB1Q86YT6 1006 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 C12orf56Q8IXR9 622 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-217ENST00000548420 CLEC18CQ8NCF0 446 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 KIAA0895Q8NCT3 520 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 OR10T2Q8NGX3 314 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 PSMG3-AS1Q96PY0 264 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms