RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CCDC33Q8N5R6 958 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 NAT16Q8N8M0 369 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 CCDC150Q8NCX0 1101 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 ZMIZ2Q8NF64 920 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 CCDC26Q8TAB7 109 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 OVCA2Q8WZ82 227 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
SCAF11-211ENST00000547950 TWNKQ96RR1 684 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 PNKPQ96T60 521 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 NT5C1AQ9BXI3 368 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 ARRDC1-AS1Q9H2J1 176 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 CYP3A43Q9HB55 503 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 APOBEC3GQ9HC16 384 aaKnown RBP7.09□□□□□ -1.27
SCAF11-211ENST00000547950 TLR8Q9NR97 1041 aaKnown RBP7.09□□□□□ -1.27
SCAF11-211ENST00000547950 IL37Q9NZH6 218 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 TBC1D14Q9P2M4 693 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 SH3BP1Q9Y3L3 701 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 CACNA1IQ9P0X4 2223 aa7.09□□□□□ -1.27
SCAF11-211ENST00000547950 F5P12259 2224 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 CCDC163A0A0D9SF12 145 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 TBC1D3BA6NDS4 549 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 CETN3O15182 167 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 TLR5O60602 858 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 LRP3O75074 770 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ADH1CP00326 375 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 APODP05090 189 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ZDHHC11BP0C7U3 371 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ADH5P11766 374 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ACO1P21399 889 aaKnown RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 GBP1P32455 592 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ATP5C1P36542 298 aaKnown RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 PRCPP42785 496 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 KDSRQ06136 332 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 MESP2Q0VG99 397 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 BECN1Q14457 450 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 SF3A2Q15428 464 aaKnown RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 CSRP2Q16527 193 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 NFIL3Q16649 462 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ANO4Q32M45 955 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 MSS51Q4VC12 460 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 LY6G5CQ5SRR4 150 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 SNX30Q5VWJ9 437 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 BTBD8Q5XKL5 378 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 KRT39Q6A163 491 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ISM2Q6H9L7 571 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 PRR23CQ6ZRP0 262 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 GPRIN1Q7Z2K8 1008 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 DDX42Q86XP3 938 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 TMEM25Q86YD3 366 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 BBS7Q8IWZ6 715 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 FMR1NBQ8N0W7 255 aaPredicted RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ALLCQ8N6M5 410 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 TSTD1Q8NFU3 115 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 SEMA4DQ92854 862 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ERCC4Q92889 916 aaPredicted RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 WBP2Q969T9 261 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ACDQ96AP0 544 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 HNRNPABQ99729 332 aaKnown RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 DNAI2Q9GZS0 605 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 FBXO44Q9H4M3 255 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 TMEM8AQ9HCN3 771 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 CSNK1G1Q9HCP0 422 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ZDHHC4Q9NPG8 344 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 ARHGEF4Q9NR80 690 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 RMND1Q9NWS8 449 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 COMMD8Q9NX08 183 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 NUDT5Q9UKK9 219 aa7.08□□□□□ -1.28
SCAF11-211ENST00000547950 PDCD11Q14690 1871 aaKnown RBP7.08□□□□□ -1.28
SCAF11-211ENST00000547950 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 FAM92AA1XBS5 289 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 MDM4O15151 490 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 CYP26A1O43174 497 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 STX10O60499 249 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 CILPO75339 1184 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 KAT7O95251 611 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 SMC2O95347 1197 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 KLF8O95600 359 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 EPB41P11171 864 aaKnown RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 RARGP13631 454 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 GTF2H1P32780 548 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 GRIA2P42262 883 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 TUBP50607 506 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 MRPS21P82921 87 aaKnown RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 GAD2Q05329 585 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 INCA1Q0VD86 236 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 ELF2Q15723 593 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 CRY1Q16526 586 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 EDRF1Q3B7T1 1238 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 PLK5Q496M5 336 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 AASDHQ4L235 1098 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 ZCWPW2Q504Y3 356 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 USP39Q53GS9 565 aaKnown RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 DCAF17Q5H9S7 520 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 PPP1R26Q5T8A7 1209 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 ZNF658Q5TYW1 1059 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 TCERG1LQ5VWI1 586 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms