RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 CASP2P42575 452 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MARCKSL1P49006 195 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 VAMP7P51809 220 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ESRRGP62508 458 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MRPS9P82933 396 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TFAMQ00059 246 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ART3Q13508 389 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RPS6KA2Q15349 733 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 VHLLQ6RSH7 139 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RSPH3Q86UC2 560 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 SLC13A5Q86YT5 568 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CCNYQ8ND76 341 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ICA1LQ8NDH6 482 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FAF2Q96CS3 445 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FAM111AQ96PZ2 611 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 NACC1Q96RE7 527 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 STK33Q9BYT3 514 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MYLK2Q9H1R3 596 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CARD9Q9H257 536 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 VPS11Q9H270 941 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RXFP1Q9HBX9 757 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ETAA1Q9NY74 926 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 REV1Q9UBZ9 1251 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MAD2L2Q9UI95 211 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PACSIN3Q9UKS6 424 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 NFS1Q9Y697 457 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 GOLGA4Q13439 2230 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CCDC78A2IDD5 438 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DPPA5A6NC42 116 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DDX3XO00571 662 aaKnown RBP eCLIP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 NEMP1O14524 444 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CALCAP01258 141 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PYGMP11217 842 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RARGP13631 454 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 AKR1B1P15121 316 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TAL1P17542 331 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ARL4CP56559 192 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MMRN1Q13201 1228 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 STAT4Q14765 748 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CNGA3Q16281 694 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 QRICH1Q2TAL8 776 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FIGNQ5HY92 759 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 IL31Q6EBC2 164 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FRMD5Q7Z6J6 570 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 YTHDF3Q7Z739 585 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ZSCAN1Q8NBB4 408 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ACTRT1Q8TDG2 376 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FAM151AQ8WW52 585 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ARHGEF26Q96DR7 871 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PTPN18Q99952 460 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 FAM213AQ9BRX8 229 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TUBB6Q9BUF5 446 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TEKT3Q9BXF9 490 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DCLRE1BQ9H816 532 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PFDN4Q9NQP4 134 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 BLOC1S4Q9NUP1 217 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 SIP14410 1827 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 IQANK1A0A1B0GTG1 560 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TCP10L2B9ZVM9 353 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 AIM2O14862 343 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 MCF2LO15068 1137 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RIPK2O43353 540 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 AVPP01185 164 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 GAP43P17677 238 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CALB2P22676 271 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 RCAN1P53805 252 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PSMC6P62333 389 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DMP1Q13316 513 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PRKG1Q13976 671 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 KPNB1Q14974 876 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TCEA2Q15560 299 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 PDCD2Q16342 344 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 SMTNL2Q2TAL5 461 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 SLC10A6Q3KNW5 377 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 C12orf60Q5U649 245 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 GPAT2Q6NUI2 795 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 UNC5AQ6ZN44 842 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 NLRX1Q86UT6 975 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TEX9Q8N6V9 391 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 XXYLT1Q8NBI6 393 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DEPTORQ8TB45 409 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 SCFD1Q8WVM8 642 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 CEP170P1Q96L14 293 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 INPP4AQ96PE3 977 aaPredicted RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ACCSQ96QU6 501 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TBC1D10AQ9BXI6 508 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 KIAA1683Q9H0B3 1180 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 WNT8AQ9H1J5 351 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 KMT5AQ9NQR1 393 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 TAS2R14Q9NYV8 317 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ADA2Q9NZK5 511 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 APEX2Q9UBZ4 518 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 KLHL3Q9UH77 587 aa5.7□□□□□ -1.5
LIMA1-203ENST00000547825 DIS3Q9Y2L1 958 aaKnown RBP5.7□□□□□ -1.5
LIMA1-203ENST00000547825 ASAP2O43150 1006 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms