RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 BBS7Q8IWZ6 715 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 PDZD8Q8NEN9 1154 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 NOC3LQ8WTT2 800 aaKnown RBP14.31□□□□□ -0.12
CCDC59-202ENST00000547758 MRGPRX1Q96LB2 322 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 GABRG3Q99928 467 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 DUSP9Q99956 384 aaKnown RBP14.31□□□□□ -0.12
CCDC59-202ENST00000547758 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 TMEM30AQ9NV96 361 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 NUMA1Q14980 2115 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 A0A1B0GTW7 788 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 MEI4A8MW99 385 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 ZNF883P0CG24 379 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 YWHAQP27348 245 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 LONP1P36776 959 aaKnown RBP14.3□□□□□ -0.12
CCDC59-202ENST00000547758 DSG2Q14126 1118 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 HECTD3Q5T447 861 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 KIAA1324Q6UXG2 1013 aaKnown RBP14.3□□□□□ -0.12
CCDC59-202ENST00000547758 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 BAHD1Q8TBE0 780 aaPredicted RBP14.3□□□□□ -0.12
CCDC59-202ENST00000547758 DNASE2BQ8WZ79 361 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 OVCA2Q8WZ82 227 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 FBXO32Q969P5 355 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 CBWD1Q9BRT8 395 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 ELOVL4Q9GZR5 314 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 IL21RQ9HBE5 538 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 DNAJC17Q9NVM6 304 aaKnown RBP14.3□□□□□ -0.12
CCDC59-202ENST00000547758 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 TOR4AQ9NXH8 423 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 TBC1D7Q9P0N9 293 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 KIF3AQ9Y496 699 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 NME7Q9Y5B8 376 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 RAD54BQ9Y620 910 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 PTPRJQ12913 1337 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 PTPRQQ9UMZ3 2332 aa14.3□□□□□ -0.12
CCDC59-202ENST00000547758 A0A087WV48 116 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 DKK1O94907 266 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
CCDC59-202ENST00000547758 GCNT3O95395 438 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 CER1O95813 267 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 TNNC2P02585 160 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 CD6P30203 668 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
CCDC59-202ENST00000547758 GRIN1Q05586 938 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 CYP4F3Q08477 520 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 NUP93Q8N1F7 819 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 ZCCHC9Q8N567 271 aaKnown RBP14.29□□□□□ -0.12
CCDC59-202ENST00000547758 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 CRELD1Q96HD1 420 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
CCDC59-202ENST00000547758 ZNF518BQ9C0D4 1074 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 SNX25Q9H3E2 840 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 PCIF1Q9H4Z3 704 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 GAREM1Q9H706 876 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 TM7SF3Q9NS93 570 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 NFE2L3Q9Y4A8 694 aa14.29□□□□□ -0.12
CCDC59-202ENST00000547758 MUC22E2RYF6 1773 aaPredicted RBP14.29□□□□□ -0.12
CCDC59-202ENST00000547758 TRABD2BA6NFA1 517 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 NEDD8-MDP1E9PL57 170 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 MAST4O15021 2626 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CACNG3O60359 315 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 EIF5BO60841 1220 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CILPO75339 1184 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 ATXN1LP0C7T5 689 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 IRF1P10914 325 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 NCAM1P13591 858 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 GAP43P17677 238 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 MATKP42679 507 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 TUBP50607 506 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CASP5P51878 434 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 C19orf57Q0VDD7 668 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 SNX30Q5VWJ9 437 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 ADGRD1Q6QNK2 874 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 IL27RAQ6UWB1 636 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 MARCH9Q86YJ5 346 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 SCUBE3Q8IX30 993 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 GPD1LQ8N335 351 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 OR6B3Q8NGW1 331 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 WBP2Q969T9 261 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 TOE1Q96GM8 510 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 XPO6Q96QU8 1125 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 UBL7Q96S82 380 aaPredicted RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CDC6Q99741 560 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 MIR1-1HGQ9H1L0 117 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 DPEP3Q9H4B8 488 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CCSER2Q9H7U1 834 aa14.28□□□□□ -0.12
CCDC59-202ENST00000547758 CHORDC1Q9UHD1 332 aaPredicted RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 FNDC3AQ9Y2H6 1198 aaKnown RBP14.28□□□□□ -0.12
CCDC59-202ENST00000547758 GFRA2O00451 464 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 CLDN5O00501 218 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 FLRT2O43155 660 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 TACC1O75410 805 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 PRB1P04280 392 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 TYRP14679 529 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms