RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 CPA3P15088 417 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 GK3PQ14409 553 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 ADRM1Q16186 407 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SNRNP35Q16560 246 aaKnown RBP11.1□□□□□ -0.63
NPAS3-205ENST00000547068 PATL1Q86TB9 770 aaKnown RBP11.1□□□□□ -0.63
NPAS3-205ENST00000547068 KBTBD6Q86V97 674 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 ZFPM1Q8IX07 1006 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 DEFB107AQ8IZN7 70 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TMEM174Q8WUU8 243 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CSRNP1Q96S65 589 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 OXCT2Q9BYC2 517 aaPredicted RBP11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SLC13A1Q9BZW2 595 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 C20orf27Q9GZN8 174 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 INIPQ9NRY2 104 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SIRPGQ9P1W8 387 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SERPINB13Q9UIV8 391 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 PCDHB2Q9Y5E7 798 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CEPT1Q9Y6K0 416 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SCN4AP35499 1836 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TCRBV7S3A2A0A539 114 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 RBM47A0AV96 593 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 GAS7O60861 476 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TSHRP16473 764 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 DSG3P32926 999 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ELK3P41970 407 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ECE1P42892 770 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 CLCN2P51788 898 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 GDF10P55107 478 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 APOFQ13790 326 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 BTG3Q14201 252 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TTC39BQ5VTQ0 682 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 GRAMD4Q6IC98 578 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 Q6ZNX1 250 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ERI1Q8IV48 349 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 SENP7Q9BQF6 1050 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 PI4K2AQ9BTU6 479 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 SHCBP1LQ9BZQ2 653 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TOPORSQ9NS56 1045 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 GGA3Q9NZ52 723 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 SCINQ9Y6U3 715 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ZHX2Q9Y6X8 837 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 hCG_1818297A0A087WSY0 165 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 SH3PXD2BA1X283 911 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 BIRC5O15392 142 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 E2F6O75461 281 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 FAM155BO75949 473 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 TMEM63AO94886 807 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 CYP3A4P08684 503 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 YY1P25490 414 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 MTTPP55157 894 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 OXCT1P55809 520 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 RARS2Q5T160 578 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 WDR75Q8IWA0 830 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 FBXW8Q8N3Y1 598 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 LXNQ9BS40 222 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 DEFB129Q9H1M3 183 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 RRAGCQ9HB90 399 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 SAE1Q9UBE0 346 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 IP6K2Q9UHH9 426 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 PSMD13Q9UNM6 376 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 APOBEC2Q9Y235 224 aaKnown RBP11.09□□□□□ -0.63
NPAS3-205ENST00000547068 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
NPAS3-205ENST00000547068 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 TRPA1O75762 1119 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 KRT37O76014 449 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 WEE2P0C1S8 567 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 RPL22P35268 128 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PSMC5P62195 406 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 MRPS5P82675 430 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 STX3Q13277 289 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ACAP1Q15027 740 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms