RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 LPIN3Q9BQK8 851 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 ABCF3Q9NUQ8 709 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 PCYOX1Q9UHG3 505 aa17.21■□□□□ 0.35
BRF1-208ENST00000546997 A8MXQ7 604 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 DGKIO75912 1065 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 PFKMP08237 780 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 PDGFRBP09619 1106 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 SYN1P17600 705 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
BRF1-208ENST00000546997 PBX3P40426 434 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 NSFP46459 744 aaKnown RBP17.2■□□□□ 0.34
BRF1-208ENST00000546997 KCNJ2P63252 427 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 CCDC142Q17RM4 750 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 SMYD5Q6GMV2 418 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 ZDHHC24Q6UX98 284 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 DSTYKQ6XUX3 929 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 CPNE8Q86YQ8 564 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 TOP1MTQ969P6 601 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 LRRC42Q9Y546 428 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 PCDHA3Q9Y5H8 950 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 WARSP23381 471 aaKnown RBP17.2■□□□□ 0.34
BRF1-208ENST00000546997 RRM1P23921 792 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 CTNNA2P26232 953 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 NOMO3P69849 1222 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 ANKRD20A2Q5SQ80 823 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 ANKRD20A1Q5TYW2 823 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 ANKRD20A3Q5VUR7 823 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 AADACL2Q6P093 401 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 FAM117BQ6P1L5 589 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 MON1BQ7L1V2 547 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 UNC93AQ86WB7 457 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 JAMLQ86YT9 394 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 TRIM51Q9BSJ1 452 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 PRKAG3Q9UGI9 489 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 RPL26L1Q9UNX3 145 aaKnown RBP17.2■□□□□ 0.34
BRF1-208ENST00000546997 KIAA1671Q9BY89 1806 aa17.2■□□□□ 0.34
BRF1-208ENST00000546997 M0QZQ0 153 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 GABRDO14764 452 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 RASGRF2O14827 1237 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SPOPO43791 374 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 ACAT1P24752 427 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 FPGSQ05932 587 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SLC29A2Q14542 456 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 TRMT10CQ7L0Y3 403 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 LRRC43Q8N309 656 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 RSPH1Q8WYR4 309 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 MRPL9Q9BYD2 267 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 KIF9Q9HAQ2 790 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 FAM49BQ9NUQ9 324 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 ZFATQ9P243 1243 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 ANAPC7Q9UJX3 599 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 CCDC85CA6NKD9 419 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 NRP1O14786 923 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 PHF2O75151 1096 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 AMHP03971 560 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 PYGMP11217 842 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SLC11A1P49279 550 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 PSMC1P62191 440 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 AUHQ13825 339 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 C2CD6Q53TS8 623 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SGO2Q562F6 1265 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 DENND1BQ6P3S1 775 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 ZNF365Q70YC5 407 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 TMEM173Q86WV6 379 aaPredicted RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 PHF13Q86YI8 300 aaPredicted RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 MICAL1Q8TDZ2 1067 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 VCPIP1Q96JH7 1222 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SUSD3Q96L08 255 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 SERPINB12Q96P63 405 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 RC3H2Q9HBD1 1191 aaKnown RBP17.19■□□□□ 0.34
BRF1-208ENST00000546997 LRRC4CQ9HCJ2 640 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 GRHL1Q9NZI5 618 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 PCDHGC3Q9UN70 934 aa17.19■□□□□ 0.34
BRF1-208ENST00000546997 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRF1-208ENST00000546997 TMEM189-UBE2V1I3L0A0 370 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 BAIAP3O94812 1187 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 VDRP11473 427 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 ODC1P11926 461 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 PTGIRP43119 386 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
BRF1-208ENST00000546997 PPP1R26Q5T8A7 1209 aaPredicted RBP17.18■□□□□ 0.34
BRF1-208ENST00000546997 KIAA0319Q5VV43 1072 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 ADAT2Q7Z6V5 191 aaKnown RBP17.18■□□□□ 0.34
BRF1-208ENST00000546997 KIRREL3Q8IZU9 778 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 TMEM86AQ8N2M4 240 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 WDTC1Q8N5D0 677 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 DDX43Q9NXZ2 648 aaKnown RBP17.18■□□□□ 0.34
BRF1-208ENST00000546997 ADAM22Q9P0K1 906 aa17.18■□□□□ 0.34
BRF1-208ENST00000546997 NT5C1B-RDH14C9J2C7 533 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 RIPK2O43353 540 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 EFCAB14O75071 495 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 MICAL2O94851 1124 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 SNUPNO95149 360 aaKnown RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 NEFHP12036 1026 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 PECAM1P16284 738 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms