RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EPHX3Q9H6B9 360 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 BRD9Q9H8M2 597 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 ASNSD1Q9NWL6 643 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 CAPN11Q9UMQ6 739 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 CPQQ9Y646 472 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
DDX54-203ENST00000546869 MYO10Q9HD67 2058 aa15.18■□□□□ 0.02
DDX54-203ENST00000546869 E2F8A0AVK6 867 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 E5RJQ4 531 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 PAPSS1O43252 624 aaPredicted RBP15.17■□□□□ 0.02
DDX54-203ENST00000546869 GPR37L1O60883 481 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 TBX18O95935 607 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 LTFP02788 710 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 MMEP08473 750 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 GDI1P31150 447 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 SCNN1AP37088 669 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 PRKCIP41743 596 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 COG7P83436 770 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 ZBED6P86452 979 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 FMO1Q01740 532 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 GRM2Q14416 872 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 MTF1Q14872 753 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 PDGFRLQ15198 375 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 GAS2L3Q86XJ1 694 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 GPIHBP1Q8IV16 184 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 C1orf131Q8NDD1 294 aaKnown RBP15.17■□□□□ 0.02
DDX54-203ENST00000546869 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
DDX54-203ENST00000546869 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 GOLGA1Q92805 767 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 OTUB2Q96DC9 234 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 RBSNQ9H1K0 784 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 SMOC2Q9H3U7 446 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 ANAPC1Q9H1A4 1944 aa15.17■□□□□ 0.02
DDX54-203ENST00000546869 SLC9A3R1O14745 358 aaPredicted RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 YWHAZP63104 245 aaKnown RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 NOMO3P69849 1222 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 PRKCQQ04759 706 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 TRIM14Q14142 442 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 SLC44A4Q53GD3 710 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 EFHC1Q5JVL4 640 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 C10orf120Q5SQS8 335 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 SFMBT2Q5VUG0 894 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 TAF3Q5VWG9 929 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 SPECC1LQ69YQ0 1117 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 CC2D1AQ6P1N0 951 aaPredicted RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 MSANTD2Q6P1R3 559 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 HTR3DQ70Z44 454 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 ERICH1Q86X53 443 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 PASD1Q8IV76 773 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 RIN3Q8TB24 985 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 IPO4Q8TEX9 1081 aaKnown RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 SLC20A1Q8WUM9 679 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 NDRG1Q92597 394 aaKnown RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 MSANTD3Q96H12 275 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 NACA2Q9H009 215 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 LUC7L2Q9Y383 392 aaKnown RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 BZW2Q9Y6E2 419 aaKnown RBP15.16■□□□□ 0.02
DDX54-203ENST00000546869 MYH10P35580 1976 aa15.16■□□□□ 0.02
DDX54-203ENST00000546869 GREM1O60565 184 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 FYNP06241 537 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 KPNA1P52294 538 aaPredicted RBP15.15■□□□□ 0.02
DDX54-203ENST00000546869 STARD6P59095 220 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 SLC6A3Q01959 620 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 GOLGA8FQ08AF8 430 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 GOLGA8DPQ0D2H9 430 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 PTPN20Q4JDL3 420 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 PPP1R2P3Q6NXS1 205 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 C1orf228Q6PIY5 440 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 HFE2Q6ZVN8 426 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 ADGRG2Q8IZP9 1017 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 CLEC4CQ8WTT0 213 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 C18orf8Q96DM3 657 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 SHDQ96IW2 340 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 DDX23Q9BUQ8 820 aaKnown RBP15.15■□□□□ 0.02
DDX54-203ENST00000546869 POPDC2Q9HBU9 364 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 TMEM51Q9NW97 253 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 STRIP2Q9ULQ0 834 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 CUL9Q8IWT3 2517 aa15.15■□□□□ 0.02
DDX54-203ENST00000546869 TMEM221A6NGB7 291 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 M0R296 226 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 PIK3R2O00459 728 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 ERBB2P04626 1255 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 GYPCP04921 128 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 MMP8P22894 467 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
DDX54-203ENST00000546869 CENPCQ03188 943 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 ARID5AQ03989 594 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 NNTQ13423 1086 aa15.14■□□□□ 0.01
DDX54-203ENST00000546869 ASIC2Q16515 512 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms