RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CHRNB2P17787 502 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 FMO1Q01740 532 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 GOLGA8FQ08AF8 430 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 GOLGA8DPQ0D2H9 430 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 PDGFRLQ15198 375 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 ASIC2Q16515 512 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 SFMBT2Q5VUG0 894 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 BEND5Q7L4P6 421 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 IRF2BP2Q7Z5L9 587 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 ZDHHC17Q8IUH5 632 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 SLC20A1Q8WUM9 679 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
CCDC38-203ENST00000546803 CPXM1Q96SM3 734 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 SYNCQ9H7C4 482 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 GKN1Q9NS71 199 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 STRIP2Q9ULQ0 834 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 CAPN11Q9UMQ6 739 aa17.62■□□□□ 0.41
CCDC38-203ENST00000546803 E2F8A0AVK6 867 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
CCDC38-203ENST00000546803 LTFP02788 710 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 CYP1A1P04798 512 aaPredicted RBP17.61■□□□□ 0.41
CCDC38-203ENST00000546803 GLI1P08151 1106 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 NOMO3P69849 1222 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 COG7P83436 770 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 ZBED6P86452 979 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 ZXDBP98169 803 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 PTPN20Q4JDL3 420 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 ERICH1Q86X53 443 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 GAS2L3Q86XJ1 694 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 RIN3Q8TB24 985 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 SYN2Q92777 582 aaPredicted RBP17.61■□□□□ 0.41
CCDC38-203ENST00000546803 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 C1QTNF1Q9BXJ1 281 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 KLF16Q9BXK1 252 aaPredicted RBP17.61■□□□□ 0.41
CCDC38-203ENST00000546803 CFAP97Q9P2B7 532 aa17.61■□□□□ 0.41
CCDC38-203ENST00000546803 TMEM221A6NGB7 291 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 M0R296 226 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 ARNTLO00327 626 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 PRKCIP41743 596 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 MLLT6P55198 1093 aaPredicted RBP17.6■□□□□ 0.41
CCDC38-203ENST00000546803 TRIM14Q14142 442 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 SLC44A4Q53GD3 710 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 EFHC1Q5JVL4 640 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 NAA35Q5VZE5 725 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 SPECC1LQ69YQ0 1117 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 TOGARAM2Q6ZUX3 1019 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 HFE2Q6ZVN8 426 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 TTC16Q8NEE8 873 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 CSGALNACT1Q8TDX6 532 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 CLEC4CQ8WTT0 213 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 FAM149B1Q96BN6 582 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 C18orf8Q96DM3 657 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 ASIC4Q96FT7 647 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 SHDQ96IW2 340 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 AGPAT1Q99943 283 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 ASNSD1Q9NWL6 643 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 MARCH2Q9P0N8 246 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 TBC1D14Q9P2M4 693 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 NUDT5Q9UKK9 219 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
CCDC38-203ENST00000546803 SH3BP1Q9Y3L3 701 aa17.6■□□□□ 0.41
CCDC38-203ENST00000546803 TTC28Q96AY4 2481 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 MDM4O15151 490 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 ERBB2P04626 1255 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 GLULP15104 373 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 GABRB2P47870 512 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 IFNAR2P48551 515 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 YWHAZP63104 245 aaKnown RBP17.59■□□□□ 0.41
CCDC38-203ENST00000546803 PRKCQQ04759 706 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 EFEMP1Q12805 493 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 OR6B2Q6IFH4 312 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 MSANTD2Q6P1R3 559 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 BMP8AQ7Z5Y6 402 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 CPA5Q8WXQ8 436 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 EDEM1Q92611 657 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 MSANTD3Q96H12 275 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 ZFYVE19Q96K21 471 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 TRIM5Q9C035 493 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 DUS2Q9NX74 493 aaKnown RBP17.59■□□□□ 0.41
CCDC38-203ENST00000546803 RASAL2Q9UJF2 1139 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 LSM7Q9UK45 103 aaKnown RBP17.59■□□□□ 0.41
CCDC38-203ENST00000546803 GREB1Q4ZG55 1949 aa17.59■□□□□ 0.41
CCDC38-203ENST00000546803 GPR37L1O60883 481 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 GYPCP04921 128 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 UNGP13051 313 aaPredicted RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 NCAM1P13591 858 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 TNFAIP3P21580 790 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 SCNN1AP37088 669 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 KPNA1P52294 538 aaPredicted RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 SLC6A3Q01959 620 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 RUNX3Q13761 415 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 MLF2Q15773 248 aaPredicted RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 CLEC16AQ2KHT3 1053 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 PPP1R2P3Q6NXS1 205 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 OLFML1Q6UWY5 402 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms