RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 CHCHD3Q9NX63 227 aaKnown RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 TMOD2Q9NZR1 351 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 UBR3Q6ZT12 1888 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 SOCS7O14512 581 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 TRDMT1O14717 391 aaKnown RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 OR6B1O95007 311 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 CDH5P33151 784 aaPredicted RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 CRHR1P34998 444 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 GRAMD1BQ3KR37 738 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 SH2D4BQ5SQS7 431 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 SLFN12LQ6IEE8 588 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 KIAA0319LQ8IZA0 1049 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 LENG1Q96BZ8 264 aaPredicted RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 FRMD8Q9BZ67 464 aaPredicted RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 STN1Q9H668 368 aaKnown RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 CYP4F11Q9HBI6 524 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 POPDC2Q9HBU9 364 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 PREBQ9HCU5 417 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 CISHQ9NSE2 258 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 PTTG2Q9NZH5 202 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 CDH22Q9UJ99 828 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 ITGA11Q9UKX5 1188 aa14.73□□□□□ -0.05
SRP54-202ENST00000546080 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
SRP54-202ENST00000546080 C15orf38-AP3S2A0A0A6YYH1 394 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 H7C0C1 242 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 UGT1A9O60656 530 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 SORBS2O94875 1100 aaKnown RBP14.72□□□□□ -0.05
SRP54-202ENST00000546080 PGM3O95394 542 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 PROCP04070 461 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 RAG1P15918 1043 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 ATP5OP48047 213 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 RPS6P62753 249 aaKnown RBP14.72□□□□□ -0.05
SRP54-202ENST00000546080 GHRHRQ02643 423 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 TUBB3Q13509 450 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 NOMO1Q15155 1222 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 PTPN20Q4JDL3 420 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 SCARA3Q6AZY7 606 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 UGT2A3Q6UWM9 527 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 DENND5BQ6ZUT9 1274 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 ARPINQ7Z6K5 226 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 PIWIL2Q8TC59 973 aaKnown RBP14.72□□□□□ -0.05
SRP54-202ENST00000546080 ACTRT2Q8TDY3 377 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 FNIP1Q8TF40 1166 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 USP6NLQ92738 828 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 DGCR14Q96DF8 476 aaKnown RBP14.72□□□□□ -0.05
SRP54-202ENST00000546080 BTBD9Q96Q07 612 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 RMDN3Q96TC7 470 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 GLIS2Q9BZE0 524 aaPredicted RBP14.72□□□□□ -0.05
SRP54-202ENST00000546080 UGT1A7Q9HAW7 530 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 UGT1A10Q9HAW8 530 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 UGT1A8Q9HAW9 530 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 CYP26B1Q9NR63 512 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 SMYD2Q9NRG4 433 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 GALNT8Q9NY28 637 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 PAK5Q9P286 719 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 PCDHGC3Q9UN70 934 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 SSX2IPQ9Y2D8 614 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 DNAJC16Q9Y2G8 782 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 ARID2Q68CP9 1835 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 SF3B1O75533 1304 aaKnown RBP eCLIP14.72□□□□□ -0.058e-10■■■■■ 32.7
SRP54-202ENST00000546080 CNTNAP2Q9UHC6 1331 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 EP400Q96L91 3159 aa14.72□□□□□ -0.05
SRP54-202ENST00000546080 TMCC1O94876 653 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 STBD1O95210 358 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 ASS1P00966 412 aaKnown RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 CST3P01034 146 aaPredicted RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 APOEP02649 317 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 ITGA2BP08514 1039 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 CSH1P0DML2 217 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 CSH2P0DML3 217 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 HIRAP54198 1017 aaPredicted RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 USP46P62068 366 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 PSMC1P62191 440 aaKnown RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 FOLH1Q04609 750 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 TAF5Q15542 800 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 RABGAP1LQ5R372 815 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 MROH9Q5TGP6 573 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 DPY19L2Q6NUT2 758 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 SWSAP1Q6NVH7 229 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 FBXL19Q6PCT2 694 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 EMC1Q8N766 993 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 TFAP2BQ92481 460 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 PDCD2LQ9BRP1 358 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 RSAD1Q9HA92 442 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 MAD1L1Q9Y6D9 718 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 ANKRD31Q8N7Z5 1873 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 AP1G1O43747 822 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 PRKCEQ02156 737 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 MYBPC3Q14896 1274 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 MTERF2Q49AM1 385 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 SEZ6Q53EL9 994 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 FASTKD1Q53R41 847 aaKnown RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 ARHGEF16Q5VV41 709 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 PGM2L1Q6PCE3 622 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 CCDC33Q8N5R6 958 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 CMASQ8NFW8 434 aaPredicted RBP14.71□□□□□ -0.05
SRP54-202ENST00000546080 TARS2Q9BW92 718 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms