RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 C1orf186Q6ZWK4 172 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PEX26Q7Z412 305 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 IFNL1Q8IU54 200 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 METTL25Q8N6Q8 603 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 MB21D1Q8N884 522 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ZSWIM2Q8NEG5 633 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PPP4R1Q8TF05 950 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 GLG1Q92896 1179 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 TMEM143Q96AN5 459 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ZFRQ96KR1 1074 aaKnown RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 MMP19Q99542 508 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 OLFM1Q99784 485 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PALMDQ9NP74 551 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 FGFR1OP2Q9NVK5 253 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 THEGQ9P2T0 379 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 SLC9A2Q9UBY0 812 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 LIMA1Q9UHB6 759 aaKnown RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RBMX2Q9Y388 322 aaKnown RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 COL4A3BPQ9Y5P4 624 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RPTORQ8N122 1335 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 GRID2IPA4D2P6 1211 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 CLOCKO15516 846 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ACSL4O60488 711 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 GGPS1O95749 300 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RARRES1P49788 294 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ENTPD1P49961 510 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RASSF2P50749 326 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ATN1P54259 1190 aaPredicted RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ATP6V0D1P61421 351 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 CD300CQ08708 224 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RALGDSQ12967 914 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PPIL2Q13356 520 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 CNGA2Q16280 664 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 NADK2Q4G0N4 442 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 TIGD2Q4W5G0 525 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 DCAF6Q58WW2 860 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 HYIQ5T013 277 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 KIAA1841Q6NSI8 718 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 FAM171BQ6P995 826 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 GLRX5Q86SX6 157 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 HEATR4Q86WZ0 1026 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 BRI3BPQ8WY22 251 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 NXPE3Q969Y0 559 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 METTL2AQ96IZ6 378 aaKnown RBP6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PHF12Q96QT6 1004 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 FERD3LQ96RJ6 166 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 RUBCNLQ9H714 662 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 TUFT1Q9NNX1 390 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 TBC1D22BQ9NU19 505 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 FBXL5Q9UKA1 691 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ANGPTL2Q9UKU9 493 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 ADAMTS5Q9UNA0 930 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 PCDHA10Q9Y5I2 948 aa6.94□□□□□ -1.3
NECAP1-208ENST00000545807 C2orf81A6NN90 581 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 LGALS16A8MUM7 142 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CXCL11O14625 94 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SCO2O43819 266 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SULT1C4O75897 302 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ARHGEF15O94989 841 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ARIH2O95376 493 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TRIM49P0CI25 452 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TRIM49CP0CI26 452 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ACTN1P12814 892 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 IST1P53990 364 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 YARSP54577 528 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 FKBP3Q00688 224 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CREB5Q02930 508 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SF3A3Q12874 501 aaKnown RBP eCLIP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SP140Q13342 867 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CGB2Q6NT52 195 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 GPAT2Q6NUI2 795 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 UGT2A3Q6UWM9 527 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 RAVER1Q8IY67 606 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ANKRD53Q8N9V6 530 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TRAPPC12Q8WVT3 735 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 FAR2Q96K12 515 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 LPIN3Q9BQK8 851 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 HERC2P3Q9BVR0 1158 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 MRPL1Q9BYD6 325 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TXLNGYQ9BZA5 131 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 MYLK2Q9H1R3 596 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SMARCAD1Q9H4L7 1026 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 NEK6Q9HC98 313 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 SMARCAL1Q9NZC9 954 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 KIAA1217Q5T5P2 1943 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PHIPQ8WWQ0 1821 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TRIM77I1YAP6 450 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 NOP56O00567 594 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CSDE1O75534 798 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CNMDO75829 334 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ALX3O95076 343 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms