RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
LTBR-214ENST00000545445 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
LTBR-214ENST00000545445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.46□□□□□ -0.41
LTBR-214ENST00000545445 SLC30A4O14863 429 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 FGF19O95750 216 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 CALCAP01258 141 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 CYP1A1P04798 512 aaPredicted RBP12.46□□□□□ -0.41
LTBR-214ENST00000545445 GZMAP12544 262 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 SKILP12757 684 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 CHRNB2P17787 502 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 ATF6P18850 670 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 CACNA2D1P54289 1103 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
LTBR-214ENST00000545445 DENND1BQ6P3S1 775 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 WDR59Q6PJI9 974 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 MTSS1LQ765P7 747 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
LTBR-214ENST00000545445 PIGZQ86VD9 579 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 ZMIZ2Q8NF64 920 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 NETO1Q8TDF5 533 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 PSMG2Q969U7 264 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 CLDN23Q96B33 292 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 KCNK16Q96T55 309 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 TMEM30AQ9NV96 361 aa12.46□□□□□ -0.41
LTBR-214ENST00000545445 SLC38A8A6NNN8 435 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 HHLA1C9JL84 531 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 TNFRSF10BO14763 440 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 CCL16O15467 120 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 NRDCO43847 1150 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 SOAT2O75908 522 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 BEST1O76090 585 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 UNGP13051 313 aaPredicted RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 PTPN2P17706 415 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 FECHP22830 423 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 PPP3CCP48454 512 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 RPL34P49207 117 aaKnown RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 KIF11P52732 1056 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 NOMO3P69849 1222 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 PFKPQ01813 784 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 MTAPQ13126 283 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 PDCLQ13371 301 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 DNAJB7Q7Z6W7 309 aaPredicted RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 TMEM110Q86TL2 294 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 CCDC170Q8IYT3 715 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 SCML4Q8N228 414 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 IPO4Q8TEX9 1081 aaKnown RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 TRMT2BQ96GJ1 504 aaKnown RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 PDLIM2Q96JY6 352 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 MYRFLQ96LU7 910 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 CCDC42Q96M95 316 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 TTLL2Q9BWV7 592 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 SLC4A5Q9BY07 1137 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 DEF6Q9H4E7 631 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
LTBR-214ENST00000545445 IL37Q9NZH6 218 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 ARHGAP20Q9P2F6 1191 aa12.45□□□□□ -0.42
LTBR-214ENST00000545445 FAM92AA1XBS5 289 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 SART1O43290 800 aaKnown RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 FBXO21O94952 628 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 TDGF1P13385 188 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 YWHAQP27348 245 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 EIF4A3P38919 411 aaKnown RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 NSFP46459 744 aaKnown RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 GPR15P49685 360 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 CDR1P51861 262 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 SLC5A3P53794 718 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 CENPCQ03188 943 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 GOLGA8FQ08AF8 430 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 GOLGA8DPQ0D2H9 430 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 COL9A2Q14055 689 aaPredicted RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 PMF1Q6P1K2 205 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 CCDC186Q7Z3E2 898 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 ERICH1Q86X53 443 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 ZDHHC17Q8IUH5 632 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 PASD1Q8IV76 773 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 WDTC1Q8N5D0 677 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 C1orf131Q8NDD1 294 aaKnown RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 PDZD8Q8NEN9 1154 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 SLC30A5Q8TAD4 765 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 VCPIP1Q96JH7 1222 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 PPP1R13BQ96KQ4 1090 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 SLITRK1Q96PX8 696 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 PCDHB18PQ96TA0 734 aa12.44□□□□□ -0.42
LTBR-214ENST00000545445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
LTBR-214ENST00000545445 NHEJ1Q9H9Q4 299 aaPredicted RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
LTBR-214ENST00000545445 CNGB3Q9NQW8 809 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms