RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 COQ4Q9Y3A0 265 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 NR2E1Q9Y466 385 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CCL15-CCL14A0A0B4J2E2 113 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 BANF1O75531 89 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 SNUPNO95149 360 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 VNN1O95497 513 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ERBB2P04626 1255 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 MYL2P10916 166 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CALB2P22676 271 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 SPRP35270 261 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 NR2C2P49116 596 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 GTF2A2P52657 109 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 HDAC4P56524 1084 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 RPL7AP62424 266 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 CCL15Q16663 113 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 TMCO4Q5TGY1 634 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 NPNTQ6UXI9 565 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 LRRC6Q86X45 466 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ATPAF2Q8N5M1 289 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 PRCCQ92733 491 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 FAM84AQ96KN4 292 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 LHX5Q9H2C1 402 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 VTA1Q9NP79 307 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ANLNQ9NQW6 1124 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 SNTG2Q9NY99 539 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 GTSE1Q9NYZ3 720 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 R3HDM2Q9Y2K5 976 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 SDR42E2A6NKP2 422 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ADM5C9JUS6 153 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 NVLO15381 856 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 PAPOLAP51003 745 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZBTB41Q5SVQ8 909 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 BTBD8Q5XKL5 378 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 LLGL2Q6P1M3 1020 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 PPP1R2P1Q96PQ5 205 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 FHDC1Q9C0D6 1143 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 EML4Q9HC35 981 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 C20orf96Q9NUD7 363 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 TBC1D23Q9NUY8 699 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 UMODL1Q5DID0 1318 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 IQCA1LA6NCM1 817 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 E5RJQ4 531 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 KDM1AO60341 852 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ANP32DO95626 131 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 LGALS2P05162 132 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 FAM200BP0CF97 657 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SERPINB8P50452 374 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SLC44A4Q53GD3 710 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 AFG1LQ8WV93 481 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 AGAP3Q96P47 875 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 NTPCRQ9BSD7 190 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 KLK14Q9P0G3 267 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 LGALS13Q9UHV8 139 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PCDHGC3Q9UN70 934 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 INPP5FQ9Y2H2 1132 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PCDHA11Q9Y5I1 949 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 HACD1B0YJ81 288 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 M0QYT0 321 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 MTSS1O43312 755 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CSDE1O75534 798 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 TMED10P49755 219 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 ARPP19P56211 112 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 MAP3K7CLP57077 242 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CCDC15Q0P6D6 951 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 KIZQ2M2Z5 673 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 WASHC2DQ5SRD0 308 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TSHZ1Q6ZSZ6 1077 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 URGCPQ8TCY9 931 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TRPM4Q8TD43 1214 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 DNAJC9Q8WXX5 260 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SLCO2A1Q92959 643 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 KLRG1Q96E93 195 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 IFT43Q96FT9 208 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CDT1Q9H211 546 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 APOBEC3GQ9HC16 384 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 ETNK2Q9NVF9 386 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 IL1RAPL1Q9NZN1 696 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SAE1Q9UBE0 346 aaPredicted RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 C3orf70A6NLC5 250 aaPredicted RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 B2RBV5 119 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 TRDMT1O14717 391 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 MAP3K6O95382 1288 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PGAM1P18669 254 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 EEF1B2P24534 225 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 RPL22P35268 128 aaKnown RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 VHLP40337 213 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 EPHB1P54762 984 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 PPIL2Q13356 520 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 XYLT1Q86Y38 959 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SPATA2LQ8IUW3 424 aaPredicted RBP5.98□□□□□ -1.45
VPS50-220ENST00000544910 CCDC33Q8N5R6 958 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 HIPK4Q8NE63 616 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 SP110Q9HB58 689 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 CYP4F11Q9HBI6 524 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS50-220ENST00000544910 TAGLN3Q9UI15 199 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 AFG3L2Q9Y4W6 797 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 ZNF831Q5JPB2 1677 aa5.98□□□□□ -1.45
VPS50-220ENST00000544910 E2F8A0AVK6 867 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms