RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 IL1RAPL1Q9NZN1 696 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 USP6P35125 1406 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 VAC14Q08AM6 782 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 KRR1Q13601 381 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 PTAR1Q7Z6K3 402 aaPredicted RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 FAM228AQ86W67 206 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 PPCSQ9HAB8 311 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 SAC3D1A6NKF1 404 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 ACSL4O60488 711 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 FAM20BO75063 409 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 GLP2RO95838 553 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 CCDC144BQ3MJ40 725 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 TCEAL5Q5H9L2 206 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 RSBN1Q5VWQ0 802 aaPredicted RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 TRIQKQ629K1 86 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 ARID3BQ8IVW6 561 aaPredicted RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 UNKQ9C0B0 810 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 FAM153AQ9UHL3 310 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 KLF15Q9UIH9 416 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 TSPAN3O60637 253 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 SLC2A4P14672 509 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 HSPA13P48723 471 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 JAMLQ86YT9 394 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 RGL4Q8IZJ4 473 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 TMEM39BQ9GZU3 492 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 CASTOR2A6NHX0 329 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 ERI2A8K979 691 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 IL5RAQ01344 420 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 NAB2Q15742 525 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 BBS4Q96RK4 519 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 PPP1R37O75864 691 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 R3HCC1LQ7Z5L2 792 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 NARS2Q96I59 477 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 MTFMTQ96DP5 389 aaKnown RBP20.63■□□□□ 0.89
BPTF-208ENST00000544778 SERPINB12Q96P63 405 aa20.63■□□□□ 0.89
BPTF-208ENST00000544778 CENPCQ03188 943 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 SRLQ86TD4 932 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 SKA1Q96BD8 255 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 APOL2Q9BQE5 337 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 DNAJC3Q13217 504 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 BARGINQ6ZT62 677 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 STRA8Q7Z7C7 330 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 DLGAP2Q9P1A6 1054 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 VTI1BQ9UEU0 232 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 NCKAP1Q9Y2A7 1128 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 CENPXA8MT69 81 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 IGF2BP3O00425 579 aaKnown RBP eCLIP20.62■□□□□ 0.893e-6■■■■□ 23.3
BPTF-208ENST00000544778 FGRP09769 529 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 ARF5P84085 180 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 TMC7Q7Z402 723 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 SLITRK2Q9H156 845 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 DUSP12Q9UNI6 340 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 SYNMO15061 1565 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 CCDC189A1A4V9 331 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 NFIXQ14938 502 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 RIBC1Q8N443 379 aaPredicted RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 IPCEF1Q8WWN9 437 aaPredicted RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 WDR24Q96S15 920 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 TRIT1Q9H3H1 467 aaKnown RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 RBM12Q9NTZ6 932 aaKnown RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 KCND2Q9NZV8 630 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 TBC1D16Q8TBP0 767 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 TRIM9Q9C026 710 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 MTMR12Q9C0I1 747 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 ANAPC2Q9UJX6 822 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 ZNF862O60290 1169 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 PABPC1P11940 636 aaKnown RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 RCAN1P53805 252 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 FNDC3BQ53EP0 1204 aaKnown RBP20.62■□□□□ 0.89
BPTF-208ENST00000544778 LRRC74BQ6ZQY2 392 aa20.62■□□□□ 0.89
BPTF-208ENST00000544778 SNPHO15079 494 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 MSH4O15457 936 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CBWD3Q5JTY5 395 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CBWD5Q5RIA9 395 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 FIG4Q92562 907 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 RHBGQ9H310 441 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 UBP1Q9NZI7 540 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 BIRC5O15392 142 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 TDRD5Q8NAT2 981 aaKnown RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 CLEC4MQ9H2X3 399 aaPredicted RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 MYMKA6NI61 221 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 DNALI1O14645 258 aaPredicted RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 C7orf25Q9BPX7 421 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 AP4S1Q9Y587 144 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 GMPSP49915 693 aaPredicted RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 SCNN1BP51168 640 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 GTF2A2P52657 109 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 ITIH5Q86UX2 942 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 ZNF677Q86XU0 584 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CNPY4Q8N129 248 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 SPPL2AQ8TCT8 520 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 METP08581 1390 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 VAV1P15498 845 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CYP2A7P20853 494 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CCND1P24385 295 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CDC42EP5Q6NZY7 148 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 CASP12Q6UXS9 341 aa20.61■□□□□ 0.89
BPTF-208ENST00000544778 ZSCAN18Q8TBC5 510 aaPredicted RBP20.61■□□□□ 0.89
BPTF-208ENST00000544778 ZNF624Q9P2J8 865 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms