RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 OTUB2Q96DC9 234 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
CIT-214ENST00000544588 UBXN6Q9BZV1 441 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 FAM124BQ9H5Z6 455 aaPredicted RBP13.84□□□□□ -0.19
CIT-214ENST00000544588 SPHK2Q9NRA0 654 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 RWDD2AQ9UIY3 292 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 USP18Q9UMW8 372 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 USP3Q9Y6I4 520 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 CACNA1IQ9P0X4 2223 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
CIT-214ENST00000544588 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.83□□□□□ -0.2
CIT-214ENST00000544588 TULP2O00295 520 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 KAT7O95251 611 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 KRT5P13647 590 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 LCP1P13796 627 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 CNR2P34972 360 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 TIE1P35590 1138 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
CIT-214ENST00000544588 BST2Q10589 180 aaKnown RBP13.83□□□□□ -0.2
CIT-214ENST00000544588 DMC1Q14565 340 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 FOXR2Q6PJQ5 311 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 HTR3DQ70Z44 454 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.83□□□□□ -0.2
CIT-214ENST00000544588 WDR5BQ86VZ2 330 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 TMEM25Q86YD3 366 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 TRIM59Q8IWR1 403 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 BHMTQ93088 406 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
CIT-214ENST00000544588 ULBP1Q9BZM6 244 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 DEC1Q9P2X7 70 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 STRIP2Q9ULQ0 834 aa13.83□□□□□ -0.2
CIT-214ENST00000544588 RIF1Q5UIP0 2472 aaKnown RBP13.83□□□□□ -0.2
CIT-214ENST00000544588 SLC12A8A0AV02 714 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 ANTXRLA6NF34 631 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 K7EQS6 105 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 PIK3R2O00459 728 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 XPO1O14980 1071 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 AXIN1O15169 862 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 PMM2O15305 246 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 APBB3O95704 486 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 ZBED1O96006 694 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 CALCAP01258 141 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 PAEPP09466 180 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 BRD2P25440 801 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 HOXA6P31267 233 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 GRIA2P42262 883 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 RGS7P49802 495 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 COG7P83436 770 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 ADIGQ0VDE8 80 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 EMC10Q5UCC4 262 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 NUDT18Q6ZVK8 323 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 SYT13Q7L8C5 426 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 ARHGEF19Q8IW93 802 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 SFTPA1Q8IWL2 248 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 CAMKK1Q8N5S9 505 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 TSTD1Q8NFU3 115 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 USP33Q8TEY7 942 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 RNF139Q8WU17 664 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 XPO6Q96QU8 1125 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 CRACR2AQ9BSW2 395 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 INTS2Q9H0H0 1204 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 CLSTN2Q9H4D0 955 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 UBE2TQ9NPD8 197 aaPredicted RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
CIT-214ENST00000544588 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
CIT-214ENST00000544588 M0QYV0 167 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 RNF225M0QZC1 329 aaPredicted RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 O00370 1275 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 RPP40O75818 363 aaKnown RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 KLF8O95600 359 aaPredicted RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 EIF2DP41214 584 aaKnown RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 MTIF2P46199 727 aaKnown RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 DGKEP52429 567 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 MESP2Q0VG99 397 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 PREPLQ4J6C6 727 aaPredicted RBP13.81□□□□□ -0.2
CIT-214ENST00000544588 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 ALLCQ8N6M5 410 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 UBR7Q8N806 425 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 TFAP2BQ92481 460 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 MARCH2Q9P0N8 246 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 GPR179Q6PRD1 2367 aa13.81□□□□□ -0.2
CIT-214ENST00000544588 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
CIT-214ENST00000544588 TULP3O75386 442 aa13.8□□□□□ -0.2
CIT-214ENST00000544588 STC2O76061 302 aa13.8□□□□□ -0.2
CIT-214ENST00000544588 SETSIPP0DME0 302 aa13.8□□□□□ -0.2
CIT-214ENST00000544588 TYRP14679 529 aa13.8□□□□□ -0.2
CIT-214ENST00000544588 USP8P40818 1118 aa13.8□□□□□ -0.2
CIT-214ENST00000544588 ID4P47928 161 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms